Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1460 ATGTCCATGGCCAAAATGCGACCAGCATTGCCCCTTCTGCTCCTCCTCCTCCTCTTCCTGTTCTCTCCCTCCGCGGCGGAGATAAAGTCGCTGACGATAAACTCCGACAGCCGCCCCATGATCCTCTTGGAGAAATTCGGGTTCACGCACAAGGGCCACGTGTCCATCGCCGTCTCCTCTGTCTCCGTGGGCGTGCTCTCCTCCTCGGTGCAACCAGAATCCTCTCGCCTGGGTTTCTTCCTCCTGAACGAAGAAGCCCTCCTCCAGGTCCTGATGGAGATCCAGCAGAACCCCTCTTTCTGCGTCTTGGACTCCCACTACATCCTCCTCCTCTTCACCTTCCGCGACCTCTCCCCTCCCCCCTTTGCCTCCTTCAACCGCTCCTACCCCGTCACCTCCCCCAACGAATACTCCCTCTTCTTCGCCAACTGCGCACCGGAAACCTCCGTCTCCATGTCCCTCCACACTGAGTCCTACAACCTCGACTCCGACTCCTCCCGCGACTACCTCTCCGCCGGCCAAACTCACCTCCCCTCTCTCTACTTCCTCTTCTTCCTCACCTACCTCTCCTTCTTCTCCCTCTGGCTCTACATCTACTTCTCCAACAAACTCTCCGTTCACCCCATTCACCTCTTAATGTCTCTCCTTCTTCTCGTGAAGGCTCTTAACCTAATCTGCGCCGCCGAGGATAAGCATTACGTCAAGGTCTCGGGTCTTCCCCATGGATGGGATGTTCTGTTCTACATCTTCCAGTTTATCCGCGTCGTTTTGCTCTTTACTGTAATCGTTTTGATAGGTACAGGATGGTCTTTTCTGAAACCCTTTTTGCAGGACAGGGAGAAGAAGGTGCTGATGATTGTCATCCCGCTTCAGGTTCTGGCCAATTTGGCTTCCGTTGTGATCGGGGAAACAGGACCTTTCATCAAAGACTGGGTTACTTGGAATCAGATTTTCTTGCTTGTGGATATTATCTGCTGTTGTGCCATTATTTTCCCTATTGTATGGTCCATTAGATCGCTGAGAGAGACTTCCAAAACCGATGGGAAGGCTTCGAGGAATTTGGCCAAGTTGACTCTGTTTAGACAGTTCTACATTGTTGTTATTGGGTACTTGTATTTCACCAGAATAGTGGTGTTCGCCTTGAGGACGATTGCGGCTTATAAGTACCAATGGGTGAGCAATGCTGCAGAGGAGACCGCGAGTCTTGCGTTTTATGTTGTCATGTTCTACATGTTCAGACCTGTGGAGAAGAACGAGTACTTTGTGCTTGATGAGGAGGAAGAGGAGGCCGCGGAAATGGCGCTCAAGGATGAAGAGTTTGAGCTTTGA 1329 0.5177 MSMAKMRPALPLLLLLLLFLFSPSAAEIKSLTINSDSRPMILLEKFGFTHKGHVSIAVSSVSVGVLSSSVQPESSRLGFFLLNEEALLQVLMEIQQNPSFCVLDSHYILLLFTFRDLSPPPFASFNRSYPVTSPNEYSLFFANCAPETSVSMSLHTESYNLDSDSSRDYLSAGQTHLPSLYFLFFLTYLSFFSLWLYIYFSNKLSVHPIHLLMSLLLLVKALNLICAAEDKHYVKVSGLPHGWDVLFYIFQFIRVVLLFTVIVLIGTGWSFLKPFLQDREKKVLMIVIPLQVLANLASVVIGETGPFIKDWVTWNQIFLLVDIICCCAIIFPIVWSIRSLRETSKTDGKASRNLAKLTLFRQFYIVVIGYLYFTRIVVFALRTIAAYKYQWVSNAAEETASLAFYVVMFYMFRPVEKNEYFVLDEEEEEAAEMALKDEEFEL* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1460 442 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR 9 441 IPR009637 GO:0016021
Gso19g1460 442 Pfam Lung seven transmembrane receptor 137 418 IPR009637 GO:0016021
Gso19g1460 442 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR FAMILY PROTEIN 9 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1460 Gso-Chr19 43480574 43482808 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1460 K22985 - gmx:100787919 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1460 19 43480574 43482808 Gso3g1474 3 40711532 40713493 GST
Gso19g1460 19 43480574 43482808 Gso2g1280 2 15850901 15852614 PCT
Gso19g1460 19 43480574 43482808 Gso10g0407 10 4327614 4330022 PCT
Gso2g1280 2 15850901 15852614 Gso19g1460 19 43480574 43482808 PCT
Gso10g0407 10 4327614 4330022 Gso19g1460 19 43480574 43482808 PCT