Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1455 ATGAGAAAGTTGTGTTTTAACCCCCAAACAGAGTCGTTTGCGTTGGCCCGCAGTTCTCCTTCTTCACCACTATCCTTAACCTCAAGCCCAACTCCTCCGAGGCTGAGCTTTTCCGAAGCTGAGGCACTGATACTGAAATGGAACCCTGACACTTCCGCTTACGCCAAAGTCACTTCCCTCTTCTACGAGGACAAAACCGAAGCCAAACACTACATTGACTCCGTTAACCAGCTTCAGAAATCCATGCATTCCTTGCTCTCTCAGAACCCTTCCTCTGAGAAACTCATTCTCGCTCATAACCTAATGCAGATGGCTATGAAGAGGCTCAAGAAAGAGTTCTACCAGATCTTATCCATGAACCGCGCACACCTTGATCCAGAATCCGTCTCCGCCAGATCCTCTCGCACCTCCGCCAACTCCAGCGCCTCCGATTACGACGACGACTTCGCTGCTGAGGACGACGATATCCGCGCCGCCGGCGACTCTATCTCCGAAGTCGAGCAGGTTTCTTCCGGCGCCATGGCAGATCTGAAACTAATCGCTGACTGCATGGTATCTTCCGGTTATGCCAAAGAATGCGTCAGCGTTTACATCTTAATACGGAAATCCATAATCGACGAAGGAATCTACCGCCTCGGCGTGGAGAAACTGAGCTCCTCGCGCGCCAACAAGATGGATTGGAATGTGCTTGATTTGAAGATCAAGAGTTGGTTAGAGGCGATAAGGATTTCCGTTAGAACGCTCTTCAACGGAGAGAGAATCCTCTGCGACCACGTCTTCAGTTACTCAGATTCTGTCAGAGAATCCTGCTTCGCCGAGATTTCGAGAGACGGTGCCTCTCTCCTTTTCGGATTCCCTGAACTCGTTGCCAAAACGAAGAAATCATCGCTGGAGAAGCTGTTCCGAGTGCTCGATATGCATGCTGTGGTTTCCGAACTGTGGCCGGAGATCGAGTCTATCTTCTCCTCCGATTACAACTCCGGCGCTCGTTCTCAAGTCCTGGTTTCGCTTCAACGACTCACCGAGTCCGCGCAAATCTTGCTCGCGGAGTTCGAGTCCACGATCCAGAAAGACTCTTCCAAGTCGGCGGTGAACGGCGGTGGCGTGCACCCGCTCACGATTCAGACGATGAATTACCTTTCAGTCCTCGCCGATTACATCAACGTGCTCTCTGATATATTCCCGCGCGACTGGCTTCCGCCGCCAAAGTCTTCGTCGCTGCCGGAATCTTATTTATACAGTCCGGAGTCTGATTACTCGGCGTCGAAGCCGGCGCTGACGGCGCGTTTTGCGTGGCTAATTCTCGTCCTCCTTTGCAAGCTCGACGGCAAGGCGAAGCATTGCAAGGACGTTTCGCTGTCTTACCTCTTTCTCGCTAACAATCTCTGGTACGTTGTCGCCAGAGTGCGAAGCTCGAACCTGCAGTACGTGCTTGGCGACGATTGGATCCTTAAGCACGAAGCTAAAGCGAAGAGGTTCGTCGCGAACTACGAGAAGGTGGCGTGGGGAGAAGTGGTTTCGTCATTGCCGGAAAATCCAGCCGCGGCGGAGGCGAGGGAGGTGTTCGAGAGCTTCAACCGCAAATTCGAGGAAGGGTATCGGAAACAGAACTCATTCGTCGTAGCTGACCGCGAATTACGAGACGAAATAAAAGGTTCGATCGCGAGAAGCATAGTGCCAAGATATCGCGAGTGGTATAATGTTGTTCTTGCTACGGTGGGAACAGTGAGGGATTTGACGGCGACGGAGTACGTGACCTTTACCCCTGAGGATATTGAAAATTACCTGGTTAACCTCTTCTTTTTTGGAACCTCATCCAGTGCTGTATCGTCCTCGCCTCTCCGGCGTTGGAGCTAA 1857 0.5202 MRKLCFNPQTESFALARSSPSSPLSLTSSPTPPRLSFSEAEALILKWNPDTSAYAKVTSLFYEDKTEAKHYIDSVNQLQKSMHSLLSQNPSSEKLILAHNLMQMAMKRLKKEFYQILSMNRAHLDPESVSARSSRTSANSSASDYDDDFAAEDDDIRAAGDSISEVEQVSSGAMADLKLIADCMVSSGYAKECVSVYILIRKSIIDEGIYRLGVEKLSSSRANKMDWNVLDLKIKSWLEAIRISVRTLFNGERILCDHVFSYSDSVRESCFAEISRDGASLLFGFPELVAKTKKSSLEKLFRVLDMHAVVSELWPEIESIFSSDYNSGARSQVLVSLQRLTESAQILLAEFESTIQKDSSKSAVNGGGVHPLTIQTMNYLSVLADYINVLSDIFPRDWLPPPKSSSLPESYLYSPESDYSASKPALTARFAWLILVLLCKLDGKAKHCKDVSLSYLFLANNLWYVVARVRSSNLQYVLGDDWILKHEAKAKRFVANYEKVAWGEVVSSLPENPAAAEAREVFESFNRKFEEGYRKQNSFVVADRELRDEIKGSIARSIVPRYREWYNVVLATVGTVRDLTATEYVTFTPEDIENYLVNLFFFGTSSSAVSSSPLRRWS* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1455 618 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 606 - -
Gso19g1455 618 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 606 IPR004140 GO:0000145|GO:0006887
Gso19g1455 618 Pfam Exo70 exocyst complex subunit 235 596 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gso19g1455 618 Gene3D Exocyst complex component Exo70 53 608 - -
Gso19g1455 618 SUPERFAMILY Cullin repeat-like 37 600 IPR016159 -
Gso19g1455 618 MobiDBLite consensus disorder prediction 127 144 - -
Gso19g1455 618 MobiDBLite consensus disorder prediction 127 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1455 Gso-Chr19 43435491 43437525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1455 40 600 EXO70 exocyst subunit family AT3G09520 56.294 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1455 K07195 - gmx:100786852 1124.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1455 19 43435491 43437525 Gso3g1467 3 40659689 40662007 GST
Gso19g1455 19 43435491 43437525 Gso10g1115 10 32523300 32541698 PCT
Gso10g0400 10 4237742 4239894 Gso19g1455 19 43435491 43437525 PCT