Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1453 ATGAGTGATGTGTTCAAGAGTGAAACAAGGGGTGAGAATCATGGAATCTTGCGTTACCCAATGTTACCTGTTAAAACACTGTTACTTCTTGTCGTGTCGTGTTGCATTTCGGATTGGGCTTTCTGGAATGAGTTATCAGTTGGGTCTTCCAGTAGAAATTCTGAACCCTTGCAACCTCCTGTATCTGGACTTGAATCTGCATGCTGTAAAGATGCAGATCAACCCAGTCCAGTCTCAGTGCTAGAATCTTCTTTTACAGATGATCTGTCATCTTGTTCTGATTGTTTTGAAAGTCTCAATGTTGACATACAAGGGCTTCGAATGCAACTCCAGTTGCTGAAGCTAGAATCTGAAGAATTTGTGGATGAACCTGTGCTAATTCAAAGTGATGAAGACGGTGGGGAGGCATCTACTGGAATTTCAGAAGACAATGAATTGCATAAGACTGGAGATAGTTGGGAGTCCTCCTACATGATTGATGTCTTGTATGAATCTGGTATCGATAGAGCTCAGCCTGATGCATTTTTGGAAGTTTGGGATTCTCAGGAATGCCCTGTTAGTCTTTCAGTGTTTGATGAACTTGAAAAGAGGTACTCTGATTGGACTAATTGTCCAAGGTCTGAAAGGAGATTGCTTTTTGATCGTATAAATTCGGGAATTATCAGTCTAAACGAGCAATTCATGGGGGTACAGCCATGGGTAAGCCCTACTACAGCCACAAATCTTTGTTCTAAATTGATTAAAAATGGACTCCAAGACGGTCTATACAGTATGCTGGGGAGCCAAGGAAAAGTAAAGGATACCGCACTGGGGAAGGTGCTGGTTAGCGAAATGCAGTGGTTGAACTTAAGAGATGACATTAATGGAATAGGTAGGGAAGTTGAGAGCTTGCTGCTAGATGATCTAGTGACAGAGATAGCCGTTACATAG 930 0.4204 MSDVFKSETRGENHGILRYPMLPVKTLLLLVVSCCISDWAFWNELSVGSSSRNSEPLQPPVSGLESACCKDADQPSPVSVLESSFTDDLSSCSDCFESLNVDIQGLRMQLQLLKLESEEFVDEPVLIQSDEDGGEASTGISEDNELHKTGDSWESSYMIDVLYESGIDRAQPDAFLEVWDSQECPVSLSVFDELEKRYSDWTNCPRSERRLLFDRINSGIISLNEQFMGVQPWVSPTTATNLCSKLIKNGLQDGLYSMLGSQGKVKDTALGKVLVSEMQWLNLRDDINGIGREVESLLLDDLVTEIAVT* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1453 309 PANTHER AFADIN 49 307 - -
Gso19g1453 309 Coils Coil 96 116 - -
Gso19g1453 309 PANTHER AFADIN 49 307 - -
Gso19g1453 309 Pfam Domain of unknown function (DUF4378) 155 305 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1453 Gso-Chr19 43402400 43409128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1453 55 308 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 40.927 3.93e-48 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1453 - - gsj:114398858 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1453 19 43402400 43409128 Gso3g1465 3 40629774 40635747 GST
Gso19g1453 19 43402400 43409128 Gso10g0396 10 4196068 4201956 PCT
Gso10g0396 10 4196068 4201956 Gso19g1453 19 43402400 43409128 PCT