Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1445 ATGGCTGGTAATAAACAAAAACTCTTTAACAGACTGAAGCCATTCATAGGTGTAGTGTTCTTACAGTTTGGATATGCTGGCATGGATGTTCTATCCAAAGCTGCACTGAACAAGGGAATGAGTAACTATGTATTTGTCGTGTACCGTCATGTTTTTGCCTTTGTTGTCACGGCCCCTTTTGCACTGATCTTGGAGAAGAAAGTAAGGCCGAAGATGACATTTTCAATTTTCATGAAGATAATGATTCTCAGCTTGCTAGAGCCTGTTATTGACCAAAATTTATATTTTTTGGGAATGAAGTACACCACAGCAACCTTTGCTGTTTCCATGTACAATGTCCTCCCTGCCATTACCTTTGTCATGGCTTGGATTTTTAGGCTTGAGAAGGTAAAACTAAAAAGTATACGCAGTCAAGCAAAGGTGGTGGGGACTTTAGCAACTGTTGCAGGTGCCATGGTCATGACACTGATAAAGGGCCCAGTACTTGATCTTTTTGGAACACACACAAGCAATACCCACAACCAGCAAAATGGTGGGGTGAATCTTCAACATGCAATAAAGGGATCGGTCATGATCACAATTGGCTGCTTTAGTTGCGCTTGTTTCATGATTCTCCAAGCTATTACCATTGAAGCCTACCCTGCTGAGCTCTCTCTTACAGCATGGATATGCCTATTGGGAACAGTTGAAGGTGGTGTAGTGGCACTGGTTATGGAAAGGAAGAATCTTTCTGCTTGGTCTCTGCAATGGGATACAAAACTGCTGGCTGCTGTCTACAGTGGCATAGTTTGCTCAGGAATGGCTTATTACATCCAAGGAGCAGTGATGAAAGATAGGGGACCGGTCTTTGTTACAACTTTTAACCCTCTCTGCATGGTCATTGTGGCTATCATGGGCTCCTTCTTTCTGGCTGAAATAATGTACCTCGGGAGGGCGGTTGGAGCTATTGTAATTATTTTAGGGCTGTATCTTGTGGTGTGGGGTAAAAGCCAAGACTACGAGTCATCAAGTCCAATTACTAAAGAGCATATATTGGCATCCAAGCAAACAGTAGAGGAGAACAACGGCAAAGAGGAGGATCATTCTAATCATGGGGTCATCACTCTCAGTAACTTAGGCGCGGGAAACATAGCACGAGATGAACAAGTATGA 1152 0.4314 MAGNKQKLFNRLKPFIGVVFLQFGYAGMDVLSKAALNKGMSNYVFVVYRHVFAFVVTAPFALILEKKVRPKMTFSIFMKIMILSLLEPVIDQNLYFLGMKYTTATFAVSMYNVLPAITFVMAWIFRLEKVKLKSIRSQAKVVGTLATVAGAMVMTLIKGPVLDLFGTHTSNTHNQQNGGVNLQHAIKGSVMITIGCFSCACFMILQAITIEAYPAELSLTAWICLLGTVEGGVVALVMERKNLSAWSLQWDTKLLAAVYSGIVCSGMAYYIQGAVMKDRGPVFVTTFNPLCMVIVAIMGSFFLAEIMYLGRAVGAIVIILGLYLVVWGKSQDYESSSPITKEHILASKQTVEENNGKEEDHSNHGVITLSNLGAGNIARDEQV* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1445 383 PANTHER WAT1-RELATED PROTEIN 9 352 IPR030184 GO:0016021|GO:0022857
Gso19g1445 383 PANTHER WAT1-RELATED PROTEIN 9 352 - -
Gso19g1445 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Gso19g1445 383 Pfam EamA-like transporter family 19 154 IPR000620 GO:0016020|GO:0016021
Gso19g1445 383 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020|GO:0016021
Gso19g1445 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1445 Gso-Chr19 43325551 43328932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1445 4 373 Nodulin-like Gene Family AT2G37460 64.595 9.97e-175 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1445 - - gmx:100777050 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1445 19 43325551 43328932 Gso3g1455 3 40546054 40548992 GST
Gso19g1445 19 43325551 43328932 Gso10g0388 10 4123023 4127987 PCT
Gso10g0388 10 4123023 4127987 Gso19g1445 19 43325551 43328932 PCT