Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1424 ATGGAACCTCGTCAGTTAACAGCACTTATTGTTGAGGATGACATGGTGATTCGAATGGTTCATCAAAAGATTCTGAACAGTGTTGGATTGAAAATTCAAGTCGCGGAAAACGGAAAAGAAGCTATAGAAATTCATGGCTCCGGACAAAGTTTTGACCTAATTCTCATGGATAGGGATATGCCCGTGATGAATGGCATTGAGGCCACAAAGACACTTCGATCAATGGGGATTAATAGCATGATTACTGGTGTATCAACACGCTCAGTGGCAGCGCATATACGAGAATTTATGGAAGCAGGACTAGATGACTACGTAGAGAAGCCTTGA 327 0.422 MEPRQLTALIVEDDMVIRMVHQKILNSVGLKIQVAENGKEAIEIHGSGQSFDLILMDRDMPVMNGIEATKTLRSMGINSMITGVSTRSVAAHIREFMEAGLDDYVEKP* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1424 108 Gene3D - 1 108 - -
Gso19g1424 108 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 3 108 - -
Gso19g1424 108 Pfam Response regulator receiver domain 9 108 IPR001789 GO:0000160
Gso19g1424 108 SMART REC_2 6 108 IPR001789 GO:0000160
Gso19g1424 108 CDD REC_hyHK_CKI1_RcsC-like 9 108 - -
Gso19g1424 108 ProSiteProfiles Response regulatory domain profile. 7 108 IPR001789 GO:0000160
Gso19g1424 108 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 108 - -
Gso19g1424 108 SUPERFAMILY CheY-like 5 108 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1424 Gso-Chr19 43182655 43183333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1424 6 108 Response Regulator Gene Family AT3G04280 47.664 4.12e-25 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso19g1424 Response_reg 1.1e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1424 - - gmx:100819813 211.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1424 19 43182655 43183333 Gso3g1433 3 40345905 40346992 GST