Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1421 ATGAATGGAGTGCAGAACAGAAGGGTTCACAATGTTGAGAAACCTTTTCCAGGATGCCTGGGAAGAATGGTGAATCTCTTTGATTTGACTGGGGATGTAAATGGAAACAAGCTACTCACGGACAGGCCTCATCGTGATGCATCTTCACTCTCAAGAAGTCAATCAGATGTTGCAAGGATCATGAGTCCTACCTTGGGTGATCAGATAGAGGATAAGCTGATTGTTTCTGACTCAATGAGAGCTACAAATAAGAAAATAAATGGAACACCCATCAAGATGCTCATAGACCAAGAAATGTCCAAAGAAGTTGTTTCCAAGCACAACTCACCACCAAATGTAGTTGCAAAATTAATGGGGCTTGAAGCCTTCCCACAGGGTGAGCCAAATTTATCTGTGGAGAGAAGCCATAGAGGAGATTATTCTCAACATATGTGTGGTCAATCAGGGACACCATTCAACCACTGGCACCTGGAAGATAGATTTATGGACAAGGAAATGCTTCATGAAGTTCATCCAAACACAGAACAGATTGCTTACAAAGATATTTATGAAATATGGCTGCAATCACAGAGAACAAGCAATGTAAGAGACAAGACACCGGAGAGAGAAAAGTGGACTGAAGATGTTAATGGGAAGAAAATGGCTCTCATTCGCCAGAAATTTATGGAAGCTAAACGTCTGTCTACAGATGAGAGGCTACGCCAGTCCAAGGAGTTTGAGGAGGCCTTGGAAGTTTTAAGTTCCAATAATGATCTGTTAGTCAGGTTATTGGATTCTCAAAATCTTTATGAACTTCAGTCTACTCCAGTAGCAGAGACTAAGCGTATTACTGTTCTTAAACCTTCGAAGATGGTTGACAATGAAAATTCTGGTGGAAAGGGGAAGAAAAACGACAAGCAGATTAAGAAAACAGCAAATGTTGGTGCTGGATGGGAGAAATACAGTCCTGCGTACTCCCCAGCTAGTCAGAAAATTGACAAGTTTCCAGTTCAACCTACTCGAATAGTGGTATTGAAGCCTAGCCCTGGGAAGACACATGAGATTAAGGCTGTGGCTTCACCTACTATGCCATCACCTCAAAATCTGCAGAGTGGAAATTTCTACCAGGAACCTGAGGATGATGATGTACTGGAATCAAGAAAAGTGCCAAGTGAAATTACACAACAAATGCATGAAAATCTGAGGAGCCATCAAAGAGATGAAACATTGTATTCTTCAGTATTCTCCAATGGCTATACTGGCGATGAGAGTTCATTCAACAAGTCAGATCATGAGTACACTGCAGGGAACTTCAGTGATTTGGAAGTTATGTCCCCATCTCCAAGACATTCTTGGGATTACGTCAATCGCTGTGGCAGTCCTTTTTCTTCCTCATCCTTCAGCCGTGCATCTTGTTCTCCTGAGTCGTCAGTATGCAGAGAGGCCAAGAAACGACTCTCTGAAAGATGGGCCATGATGTCATCAAGTAAGGGTTCTCAAGAACAAAGGCATGTGCGTAGAAGCTCTACCTTGGGTGAGATGCTTGCTCTTTCGGATATAAAGAAATCTGTAATATCTGAGTTTGAGGGTATTCATAAAGAACAGGAGCCAAGTGAATCTGCTTCTTGTAGTCGAAATTTTAGTGCTGAAACATGTGTGGATGGTTCTCCTAGAAACCTTTCTAGGTCAAAATCTGTTCCGACATCTTCTACTGTCTATGAAAATGGGCTCAATGTTGAAGTTTGTGATAATGATGCTGGCAAAGCACATGGGTCTGGGGAGCTGACAAAGTCAAAGAGTATGAAATCATCGTTTAAAGGGAAAGTTACTAGTTTCTTCTTCTCAAGGAATAAGAAACCATCCAGAGAAAAATCTTGTCTATCTCAATCTAAAATTGAATCCCAATCCACTGTCATTGAAGCATCAGATTCTCCAGTGAATTTGTCTAGAGTCCTTACGGATGATGTGTCTCAAAGTTTCAACAGTGGATCCATCGGACAGTGTTCTCTTCCAGCTCCATATGAATCATCAGGCAAAATTTTAGCAGATTCTAACTCTAATGGACAAGGTGTTGTACCACTGGAGCCTGGATTGACTCTGTCAAAGCCCATGGTGCCTGGGATTTCAAGTGAAAACCAGGGTCAGCCCAGTCCAATTTCTGTTTTAGAGCCTCCATTTGAAGATGATAATGCTGTTATCGAGTCCTTGGGCTGTTTGAGGGGTGGTCAGCTGGGATCACGGGTGTCTCTGAAGTCTAATTTAATTGATAAATCACCACCTATAGAATCAATCGCCCGGACCCTCTCATGGGACGATTCTTGTGCAGAGGTGGCAAGTCCATACCCTTTGAAGCCCTCGTTGGCATCCTTAGACACCAAGGTAGAGGATCAAGACTGGTTCGTCTTTGTTGAGAAACTACTATCAGCTGCTGGAATTGATGATCAAGTGCAGCCTGACTCGTTTTACGCAAGATGGCATTCCCTAGAAAGCCCATTGGATCCATCATTGAGGGACAAATACGCCAATCTCGATGACACGGAGCCTCAGCAGCTCCATGAGGCCAAGCGAAGGCAGAGGAGGTCTAATCAGAAGCTTGTATTCGATTGTGTAAATATTGCCCTAATAGAAATTACTGGTTATGGATCAGAGAAGAATTACTTGATGGGTAGGTTGTGCAGTGGGAGCCACAGCAGGGTCCAAGTTCCAGAAGCTGCACCTCCTCCCCCATTGGTGGACCTCATTGTGGCCCAGATGAAGGAGTTAATATCTAGTGCAATGAGGTCTGTTTGGGTGGATTGTGGGGACAGTAACAGCCTGGTGGTAGAGAGTGTTGTCAGAAAAGAGATTGTAGGGAAAGGGTGGGTTGAGCTTATGGGATTGGAGATGGATTTTTTGGTGAAGGAATTTGAGGGGAAGTTGCTTGAAGAACTTGTGGAGGATGCAGTGGTTGATTTGACAGGCAGGGCCTGA 2949 0.4347 MNGVQNRRVHNVEKPFPGCLGRMVNLFDLTGDVNGNKLLTDRPHRDASSLSRSQSDVARIMSPTLGDQIEDKLIVSDSMRATNKKINGTPIKMLIDQEMSKEVVSKHNSPPNVVAKLMGLEAFPQGEPNLSVERSHRGDYSQHMCGQSGTPFNHWHLEDRFMDKEMLHEVHPNTEQIAYKDIYEIWLQSQRTSNVRDKTPEREKWTEDVNGKKMALIRQKFMEAKRLSTDERLRQSKEFEEALEVLSSNNDLLVRLLDSQNLYELQSTPVAETKRITVLKPSKMVDNENSGGKGKKNDKQIKKTANVGAGWEKYSPAYSPASQKIDKFPVQPTRIVVLKPSPGKTHEIKAVASPTMPSPQNLQSGNFYQEPEDDDVLESRKVPSEITQQMHENLRSHQRDETLYSSVFSNGYTGDESSFNKSDHEYTAGNFSDLEVMSPSPRHSWDYVNRCGSPFSSSSFSRASCSPESSVCREAKKRLSERWAMMSSSKGSQEQRHVRRSSTLGEMLALSDIKKSVISEFEGIHKEQEPSESASCSRNFSAETCVDGSPRNLSRSKSVPTSSTVYENGLNVEVCDNDAGKAHGSGELTKSKSMKSSFKGKVTSFFFSRNKKPSREKSCLSQSKIESQSTVIEASDSPVNLSRVLTDDVSQSFNSGSIGQCSLPAPYESSGKILADSNSNGQGVVPLEPGLTLSKPMVPGISSENQGQPSPISVLEPPFEDDNAVIESLGCLRGGQLGSRVSLKSNLIDKSPPIESIARTLSWDDSCAEVASPYPLKPSLASLDTKVEDQDWFVFVEKLLSAAGIDDQVQPDSFYARWHSLESPLDPSLRDKYANLDDTEPQQLHEAKRRQRRSNQKLVFDCVNIALIEITGYGSEKNYLMGRLCSGSHSRVQVPEAAPPPPLVDLIVAQMKELISSAMRSVWVDCGDSNSLVVESVVRKEIVGKGWVELMGLEMDFLVKEFEGKLLEELVEDAVVDLTGRA* 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1421 982 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 981 - -
Gso19g1421 982 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 981 - -
Gso19g1421 982 MobiDBLite consensus disorder prediction 543 562 - -
Gso19g1421 982 Pfam Protein of unknown function (DUF3741) 218 261 IPR022212 -
Gso19g1421 982 Pfam Domain of unknown function (DUF4378) 792 973 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1421 Gso-Chr19 43128447 43133879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1421 1 979 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 45.309 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1421 - - gmx:100816611 1931.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1421 19 43128447 43133879 Gso3g1429 3 40295994 40301562 GST
Gso19g1421 19 43128447 43133879 Gso10g0365 10 3865961 3870839 PCT
Gso10g0365 10 3865961 3870839 Gso19g1421 19 43128447 43133879 PCT