Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1420 ATGGAGAACTTGTTGCGCCTAGTAGACCACGAAGACTTCTTCTCTCGTCGTTGCATTTGGGTGAATGGCCCTATAATCATAGGGGCAGGACCCTCAGGGCTAGCCACAGCAGCATGCCTTAGAGAACAAGGGGTACCCTTCATGGTTCTCGAACGTGCAGATTGCATAGCCTCACTGTGGCAAAAACGAACCTACGACAGACTCAAACTTCACCTTCCAAAACAATTCTGCCAGCTCCCGAAACTACCCTTCCCTGAAGACTTCCCTGAATACCCCACAAAGAAACAGTTCATTGAGTACTTAGAATCATATGCTAAGCACTTCGAGATCAATCCTCAGTTCAACGAGTGTGTGCAGTCCGCAAGGTACGATGAGACAAGCGGCTTGTGGCGGGTTAAGACCGTTTCTTCGAGTGGCGCCGCCGCCCGCGGCGAGATTGAGTACATTTGCAGGTGGCTCGTGGTGGCCACCGGGGAGAATGCGGAGTGTGTTATGCCCGATATTGAAGGGTTGAGTGAGTTCAAAGGTGATGTGATCCATGCTTGTGATTACAAGTCAGGGGAGAGCTTCAGGGGAAAGAAGGTTCTTGTTGTTGGTTGTGGCAATTCCGGCATGGAACTCTCACTTGACCTTTGCAACCACCATGCCTCTCCATCCATGGTTGTTCGTAGCTCGGTTCACGTGTTGCCTAGAGAAGTGTTTGGGATATCAACTTTTGAATTGGCAGTTATGTTGCTGCAATGGCTGCCCCTTTGGCTTGTTGACAAGATTCTCTTGATCTTGGCATGGTTTGTTTTGGGGAACATTGAGAAGTTGGGGCTCAAAAGGCCTTCAATGGGTCCTTTGGAGCTTAAGAACACAAAGGGGAAGACCCCAGTTTTGGATATTGGTGCCTTGGAGAAGATTAGATCCGGTGACATAGAAGTTGTGCCAGGAATCAAGAGGTTCAACAATGGGGAAGTTGAGTTTGTTAATGGTGAAAAGCTTGATATTGATGCAATAGTGCTTGCAACCGGTTACCGCAGCAATGTCCCTTCTTGGCTTCAGGAAGGTGAATTTTTCTCAAAGAATGGATACCCAAAGATGCCATTCCCTCACAGTTGGAAGGGAAATGCTGGGCTTTATGCTGTGGGGTTCACAAAGAGAGGGCTCTCTGGTGCTTCTTCTGATGCTGTGAAAATTGCTCAAGATATTGGCCAAGTTTGGAAAAATGAGACTAAGCAAAAGAAACAGCGCACTACCGCTTGTCATAGACGTTGCATTTCACAGTTCTAA 1275 0.4784 MENLLRLVDHEDFFSRRCIWVNGPIIIGAGPSGLATAACLREQGVPFMVLERADCIASLWQKRTYDRLKLHLPKQFCQLPKLPFPEDFPEYPTKKQFIEYLESYAKHFEINPQFNECVQSARYDETSGLWRVKTVSSSGAAARGEIEYICRWLVVATGENAECVMPDIEGLSEFKGDVIHACDYKSGESFRGKKVLVVGCGNSGMELSLDLCNHHASPSMVVRSSVHVLPREVFGISTFELAVMLLQWLPLWLVDKILLILAWFVLGNIEKLGLKRPSMGPLELKNTKGKTPVLDIGALEKIRSGDIEVVPGIKRFNNGEVEFVNGEKLDIDAIVLATGYRSNVPSWLQEGEFFSKNGYPKMPFPHSWKGNAGLYAVGFTKRGLSGASSDAVKIAQDIGQVWKNETKQKKQRTTACHRRCISQF* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1420 424 Gene3D - 24 408 IPR036188 -
Gso19g1420 424 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 10 422 - -
Gso19g1420 424 SUPERFAMILY FAD/NAD(P)-binding domain 25 230 IPR036188 -
Gso19g1420 424 Pfam Flavin-binding monooxygenase-like 26 345 IPR020946 GO:0004499|GO:0050660|GO:0050661
Gso19g1420 424 PRINTS Pyridine nucleotide disulphide reductase class-II signature 23 45 - -
Gso19g1420 424 PRINTS Pyridine nucleotide disulphide reductase class-II signature 190 214 - -
Gso19g1420 424 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Gso19g1420 424 PRINTS FAD-dependent pyridine nucleotide reductase signature 194 212 - -
Gso19g1420 424 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED 10 422 - -
Gso19g1420 424 SUPERFAMILY FAD/NAD(P)-binding domain 192 378 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1420 Gso-Chr19 43098392 43100610 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1420 K11816 - gmx:100819987 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1420 19 43098392 43100610 Gso3g1428 3 40271930 40274324 GST
Gso19g1420 19 43098392 43100610 Gso10g1197 10 35951584 35954312 PCT
Gso10g0362 10 3830499 3832867 Gso19g1420 19 43098392 43100610 PCT
Gso10g1451 10 40900369 40908407 Gso19g1420 19 43098392 43100610 PCT