Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1418 ATGACCGCCGGCGGCTGCTCTGCCGGAATTTCGCCACCTGCCGGTCACTCCTCAAAGCCTCTTCTCTCTCCTGACGATGCTCTTCGCTGGTGTCGTGTTCGGCGAGAGAGAATGCCGGTGTCCGTCGTCTTCCTCCTCGCTCTTCTCAACTTGCTTTTCTCTTGCCAAGGTTCTTTGCATGCAGTGAAGTCTATTTCTCTGAGTGTGTCATTTGCTTCATCTGAACGGGCTAAAATGTGGCTTGTGAAACCTTCTTCTGGACCATCTTCTGCACCCGTGCCATCTCCATCTTATCATGGTCCTCATGTGACTCCAAGACCAAGACATCATTATCATCACCGTCACCATCACAGCATGAGGCCTTATGTAGCAGCTCCACCCCCTTCAAAAGATCAAGCTTGTGACCAAACCTGTACTGATCCGCTCACATCAAGTCCCTTTGGTTCACCTTGTGGTTGTGTATTTCCCATGAAAATCAGACTTACACTGGATGTAGCTCCTTATGCTGTTTTTCCGGTAATGACTGAGTTAGAGAATGAAATTGCATTAGGCACATATTTAGAGCAGAGTCAGGTGAAGATAATGGGTGCCACTGCTGACAGTCAAAATCAGGGAAGAACTATTGTTGATATTAACTTGGTTCCACTGGGAGAGAAATTTGACAATACAACTGCAGCTCTTACATATGAGAGGTTTTGGCACAAGAAAGTTCCTCTAAATAGGAGCCTTTTTGGCGATTATGCTGTTGTGTACATTATTTATCCAGGAATGCCATCATCGCCACCATATGGATCTTTAACTGGGAGCAGTCCTAGTCAAAGTGTTGATGGTATTCTGCCAGTCAGTGCCAACTTTGTCAGCAAGAACCAGAAAATGAATCTCAGGACCATAATCATCATTGCTTTATCTTCCTTTGTACTCTTGCTGGTTTTGGTGGGAGCATTTTCAATTATTTTGAAATGGAGGAAGACTGGGAGACCCTCAAGTGCTGTTGGCCCTGCATTCACATCATCTCTAAACAAGAGATCAGGCTTGGGGTCTATGTTGTCAAGTAGTATTACAAGCTCGACATCAATTTCACTTATGTCCACAATGGCTACTTCCCTTCTCTCTGTTAAAACATTTTCACTTTCTGAGCTTGAGAAAGCAACAGATAAGTTTAGTTCAAAGAGAGTTCTAGGTGAAGGAGGATTTGGACGTGTTTATAGTGGGACATTGGAAGATGGGGCTGAAATTGCAGTTAAGATGCTAACAAGGGATAATCATCAGAATGGAGACCGTGAATTTATTGCAGAGGTTGAAATGCTAAGCCGTCTGCATCACCGTAACCTAGTGAAACTGATTGGTATATGCATTGAAGGGCGCAGGCGTTGCTTGGTGTATGAGCTTGTTCGCAATGGCAGTGTTGAGTCCCATCTGCATGGTGACGACAAGATAAAGGGAATGCTAGATTGGGAAGCAAGGATGAAGATTGCCCTAGGAGCTGCAAGAGGACTGGCCTATCTTCACGAGGATTCCAATCCCCGTGTTATTCACCGTGACTTCAAAGCTAGCAATGTGTTACTAGAAGATGACTTTACTCCCAAAGTTTCTGATTTTGGCTTGGCAAGAGAAGCAACTGAAGGAAGTAATCATATTTCAACGCGGGTGATGGGAACTTTTGGGTATGTTGCCCCAGAATATGCGATGACAGGCCATTTACTCGTCAAAAGTGATGTTTATAGTTATGGTGTTGTGCTGCTTGAACTTCTCACAGGCAGAAAGCCAGTGGATATGTCTCAACCTCAGGGACAGGAGAATCTTGTAACTTGGGCGCGGCCAATGTTGACGAGTAGAGAAGGTGTAGAACAGCTGGTGGATCCATCTTTGGCTGGAAGTTACAACTTTGATGACATGGCAAAGGTTGCTGCTATCGCTTCAATGTGTGTTCACTCAGAGGTTACACAGAGACCTTTTATGGGTGAAGTTGTGCAGGCTCTCAAGTTAATATACAACGATACAGATGAGACTTGTGGAGATTATTGTAGTCAGAAGGATTCCTCTGCTCAGGAATCTGATTTTAGAGGTGACCTTGCCCCTTCTGATAGCAGTTGGTGGAATGCGGGAGGGCTAACCCCTCGAATAACTTACGGGCAAGCTTCTTCCTTCATCACTATGGAATACAGTTCCGGTCCACTTGAAGAAATGGAGAACAGACCCTTTTCAACTTCAAGCTTGATTGGGGATGAAATATCTTTACCGATTAGGCATGGGAATAGATCAGGGCCCTTAAGAACAGTCCGAAACAAGCTGTCCTTATATAGATTTACAGGAAGTCGGAGTGAGCATGGAGGACCTTCTTCCAAGCCCAATTGGAACGATGGTTACTGGGTTTAA 2376 0.4491 MTAGGCSAGISPPAGHSSKPLLSPDDALRWCRVRRERMPVSVVFLLALLNLLFSCQGSLHAVKSISLSVSFASSERAKMWLVKPSSGPSSAPVPSPSYHGPHVTPRPRHHYHHRHHHSMRPYVAAPPPSKDQACDQTCTDPLTSSPFGSPCGCVFPMKIRLTLDVAPYAVFPVMTELENEIALGTYLEQSQVKIMGATADSQNQGRTIVDINLVPLGEKFDNTTAALTYERFWHKKVPLNRSLFGDYAVVYIIYPGMPSSPPYGSLTGSSPSQSVDGILPVSANFVSKNQKMNLRTIIIIALSSFVLLLVLVGAFSIILKWRKTGRPSSAVGPAFTSSLNKRSGLGSMLSSSITSSTSISLMSTMATSLLSVKTFSLSELEKATDKFSSKRVLGEGGFGRVYSGTLEDGAEIAVKMLTRDNHQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVRNGSVESHLHGDDKIKGMLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSNHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPQGQENLVTWARPMLTSREGVEQLVDPSLAGSYNFDDMAKVAAIASMCVHSEVTQRPFMGEVVQALKLIYNDTDETCGDYCSQKDSSAQESDFRGDLAPSDSSWWNAGGLTPRITYGQASSFITMEYSSGPLEEMENRPFSTSSLIGDEISLPIRHGNRSGPLRTVRNKLSLYRFTGSRSEHGGPSSKPNWNDGYWV* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1418 791 PANTHER OS01G0750732 PROTEIN 42 788 - -
Gso19g1418 791 MobiDBLite consensus disorder prediction 771 791 - -
Gso19g1418 791 ProSitePatterns Serine/Threonine protein kinases active-site signature. 510 522 IPR008271 GO:0004672|GO:0006468
Gso19g1418 791 Gene3D Phosphorylase Kinase; domain 1 358 463 - -
Gso19g1418 791 MobiDBLite consensus disorder prediction 84 126 - -
Gso19g1418 791 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 42 788 - -
Gso19g1418 791 MobiDBLite consensus disorder prediction 103 120 - -
Gso19g1418 791 ProSitePatterns Protein kinases ATP-binding region signature. 393 415 IPR017441 GO:0005524
Gso19g1418 791 MobiDBLite consensus disorder prediction 1 21 - -
Gso19g1418 791 CDD STKc_IRAK 393 663 - -
Gso19g1418 791 ProSiteProfiles Protein kinase domain profile. 387 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g1418 791 SUPERFAMILY Protein kinase-like (PK-like) 365 663 IPR011009 -
Gso19g1418 791 Pfam Protein tyrosine and serine/threonine kinase 389 660 IPR001245 GO:0004672|GO:0006468
Gso19g1418 791 Gene3D Transferase(Phosphotransferase) domain 1 464 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1418 Gso-Chr19 43038462 43044912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1418 134 780 Receptor kinase-like Gene Family AT5G56890 53.423 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gso19g1418 PK_Tyr_Ser-Thr 2.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1418 - - gmx:100815554 1476.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1418 19 43038462 43044912 Gso3g1423 3 40197440 40203862 GST
Gso19g1418 19 43038462 43044912 Gso10g0356 10 3730773 3737921 PCT
Gso10g0356 10 3730773 3737921 Gso19g1418 19 43038462 43044912 PCT