Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso19g1414 | ATGGCAACTCAAGGTCAAGTCATTACCTGCAAAGCTGCGGTGGCCTGGGAACCCAACAAGCCCTTAACTGTCCAAGACGTTCAGGTGGCTCCGCCTCAGGCCGGCGAGGTCCGTGTCCAAATCCTCTTCACCGCTCTCTGCCACACCGATGCTTACACTTGGGGCGGCAAGGATCCCGAAGGTCTCTTCCCCTGTATTCTTGGCCATGAAGCTGCAGGGATTGTGGAGAGTGTTGGAGAAGGTGTTACTAATGTTCAGCCTGGGGATCATGTCATTCCCTGTTATCAGGCTGAGTGTGGGGAGTGCAAGACTTGCAAATCAGGGAAGACAAACCTATGCGGCAAGGTTCGTTCCGCCACTGGAGTTGGGGTCATGCTCAATGATGGGAAGAGTCGGTTCTCGATTAATGGGAAGCCTATTTATCATTTCATGGGAACATCCACTTTTAGTCAATACACTGTTGTTCATGATGTTAGTGTAGCTAAGATTGACCCGAAGGCACCTCTGGAGAAAGTTTGTCTTCTTGGATGTGGTGTTTCAACTGGCCTTGGAGCTGTCTGGAACACTGCAAAAGTGGAGTCAGGGTCCATTGTTGCTATTTTTGGCCTTGGAACTGTTGGGCTTGCTGTTGCAGAGGGTGCTAAAACTGCTGGTGCATCCCGGGTTATTGGCATAGATATTGACAGCAAGAAGTTTGATGTAGCAAAAAACTTTGGAGTCACTGAGTTTATAAATCCAAATGAACATGATAAACCAATCCAGCAGGTCATAATTGATCGCACAGATGGTGGAGTTGATTATAGCTTTGAGTGTATTGGAAATGTCTCCGTGATGAGAGCTGCGTTGGAATGCTGCCACAAGGGCTGGGGGACGTCAGTTATTGTAGGTGTTGCAGCATCAGGGCAGGAAATATCAACCCGTCCTTTCCAGTTGGTGAGTGGACGAGTCTGGAAAGGAACAGCTTTTGGTGGCTTCAAGAGCAGGTCACAGGTGCCTTGGCTTGTAGACAAGTACTTGAAGAAGGAAATCAAGGTTGATGAGTACATTACCCATACTTTGACACTTTCGGAGATCAACAAGGCTTTTGATCTTTTGCATGAAGGGGGATGCCTTCGCTGTGTGCTTTCTACACAAGAATGA | 1140 | 0.4816 | MATQGQVITCKAAVAWEPNKPLTVQDVQVAPPQAGEVRVQILFTALCHTDAYTWGGKDPEGLFPCILGHEAAGIVESVGEGVTNVQPGDHVIPCYQAECGECKTCKSGKTNLCGKVRSATGVGVMLNDGKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPKAPLEKVCLLGCGVSTGLGAVWNTAKVESGSIVAIFGLGTVGLAVAEGAKTAGASRVIGIDIDSKKFDVAKNFGVTEFINPNEHDKPIQQVIIDRTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVSGRVWKGTAFGGFKSRSQVPWLVDKYLKKEIKVDEYITHTLTLSEINKAFDLLHEGGCLRCVLSTQE* | 380 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso19g1414 | 379 | SUPERFAMILY | GroES-like | 326 | 375 | IPR011032 | - | |
Gso19g1414 | 379 | TIGRFAM | adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | 10 | 375 | IPR014183 | GO:0006069|GO:0008270|GO:0051903 | |
Gso19g1414 | 379 | Pfam | Alcohol dehydrogenase GroES-like domain | 35 | 162 | IPR013154 | - | |
Gso19g1414 | 379 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 168 | 341 | IPR036291 | - | |
Gso19g1414 | 379 | Gene3D | - | 13 | 372 | - | - | |
Gso19g1414 | 379 | Gene3D | - | 182 | 320 | - | - | |
Gso19g1414 | 379 | CDD | alcohol_DH_class_III | 8 | 375 | IPR014183 | GO:0006069|GO:0008270|GO:0051903 | |
Gso19g1414 | 379 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 68 | 82 | IPR002328 | GO:0008270|GO:0016491 | |
Gso19g1414 | 379 | PANTHER | S-(HYDROXYMETHYL)GLUTATHIONE DEHYDROGENASE | 3 | 378 | - | - | |
Gso19g1414 | 379 | Pfam | Zinc-binding dehydrogenase | 206 | 330 | IPR013149 | - | |
Gso19g1414 | 379 | PANTHER | ALCOHOL DEHYDROGENASE | 3 | 378 | - | - | |
Gso19g1414 | 379 | SUPERFAMILY | GroES-like | 3 | 197 | IPR011032 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso19g1414 | Gso-Chr19 | 42992361 | 42995447 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso19g1414 | 10 | 331 | Monolignol Biosynthesis Gene Families | AT1G72680 | 26.364 | 1.88e-13 | 68.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso19g1414 | K00121 | - | gmx:100816775 | 775.393 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso19g1414 | 19 | 42992361 | 42995447 | Gso3g1419 | 3 | 40158233 | 40161342 | GST | |
Gso19g1414 | 19 | 42992361 | 42995447 | Gso10g0353 | 10 | 3706419 | 3710255 | PCT | |
Gso10g0353 | 10 | 3706419 | 3710255 | Gso19g1414 | 19 | 42992361 | 42995447 | PCT |