Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1410 ATGTTTGAAAGAGTTGGGATAAAAGATGTTACTGCTGCGAAAAATGGCAAAGAAGCCGTGGATCTTCATCGCATTAATGGTCAAAGTTTTGACCTGATTCTCATGGATAAGGACATGCCTATCATGAATGGAATTCAGGCAACAAAGGAACTTCGCTCAACGGGGATCAGTAGCAAGATTATTGGTGTGTCGTCATCAAGCCGTGAAGAGAGTAATGTACAAGAATTTGTTGAAGCGGGGCTAGATGACTACTACATGAAACCCTTGACCGAAGAAATGCTTAGAGAAATTCTTGATAAGATCAAGCCTTGA 312 0.4103 MFERVGIKDVTAAKNGKEAVDLHRINGQSFDLILMDKDMPIMNGIQATKELRSTGISSKIIGVSSSSREESNVQEFVEAGLDDYYMKPLTEEMLREILDKIKP* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1410 103 Pfam Response regulator receiver domain 2 98 IPR001789 GO:0000160
Gso19g1410 103 Gene3D - 1 102 - -
Gso19g1410 103 ProSiteProfiles Response regulatory domain profile. 1 102 IPR001789 GO:0000160
Gso19g1410 103 SUPERFAMILY CheY-like 2 101 IPR011006 -
Gso19g1410 103 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 5 102 - -
Gso19g1410 103 SMART REC_2 1 98 IPR001789 GO:0000160
Gso19g1410 103 CDD REC_hyHK_CKI1_RcsC-like 1 98 - -
Gso19g1410 103 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1410 Gso-Chr19 42960586 42961276 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1410 12 91 Response Regulator Gene Family AT3G04280 51.250 6.53e-22 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso19g1410 Response_reg 2e-18 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1410 - - gmx:100813957 190.66