Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1363 ATGGCCAGGGAGCAAATTCAGGTGCTGAACGCGCTTGATGTGGCGAAAACACAATGGTACCATTTCACTGCAATCATCATTGCTGGAATGGGCTTCTTCACCGATGCATATGATCTATTCTGCATATCCCTTGTTACGAAGTTGCTTGGCCGAATATACTACCACGTTGATGGCGCAGCAAAGCCAGGAACATTGCCTCCCAATGTTTCAGCTGCTGTAAATGGTGTGGCTTTCTGTGGAACACTTTCAGGCCAGCTTTTCTTTGGTTGGCTTGGTGATAAGATGGGAAGGAAAAAAGTCTATGGCATGACTCTGATGCTGATGGTAATATGCTCCATCGGTTCCGGCCTTTCATTCGGACATAGCGCAAAATCCGTGATAGCAACTCTCTGCTTCTTCCGGTTCTGGCTTGGATTTGGTATTGGTGGAGACTATCCACTTTCTGCTACCATAATGTCTGAGTATTCTAACAAGAAGACTCGCGGTGCATTCATTGCGGCGGTGTTTGCCATGCAGGGTTTTGGAATTTTGGCTGGTGGTATCTTTGCAATTATAATTTCAGTTGCATTCAAGGAAAGGTTTGATGCTCCACCATATGAGCTTGATCCAGCTGGCTCAACTGTTCCACAAGCAGACTACATTTGGAGGATAATTGTGATGGTTGGAGCACTCCCAGCTGCATTGACTTACTACTGGAGGATGAAGATGCCCGAAACTGCTCGTTATACCGCTCTAGTCGCCAAGAACACGAAGCAGGCAGCAGCAGACATGTCTAAGGTTCTGCAGGTTGAGATTCAAGCTGAACCACAGAAAGAGGAGCAGAAGGCTAACTCATATGGCTTGTTTTCCAAGGACTTCCTCAGTCGCCATGGACTGCATCTACTCGGTACAGCAAGCACATGGTTCTTGCTTGATATTGCATTCTATAGCCAAAATCTTTTCCAGAAGGATATCTTCAGTGCAATTGGTTGGATACCTCCTGCAAAAACCATGAATGCCGTTGAGGAAGTTTACAGAATTGCAAGGGCTCAAACACTTATTGCTCTATGCAGTACAGTTCCTGGCTACTGGTTCACAGTGGCTCTCATTGACAAGATAGGAAGATTTGCTATCCAATTGATGGGATTCTTCTTTATGACTGTCTTCATGTTTGCTCTTGCCATTCCTTATGATCACTGGACTCATAAGGATAACCGGATAGGATTCGTGGTGATTTATTCATTGACCTTCTTCTTTGCAAATTTCGGGCCTAACGCCACCACGTTTGTCGTGCCCGCAGAGATTTTCCCAGCTAGGTTCCGATCTACTTGCCACGGAATCTCATCAGCATCCGGGAAGCTCGGGGCTATAGTTGGTGCATTTGGGTTCTTGTACTTGGCACAAAACAAGGACAAGAGCAAAGCAGATGCAGGGTACCCTGCAGGTATTGGTGTGAAGAATGCCCTTATTGTCTTGGGTGTGGTTAATATTTTAGGCTTCTTCTTTACATTCTTGGTGCCTGAGGCAAACGGAAAATCATTGGAGGAGATGTCAGGTGAGAATGATGAGGATGTTGGAACCCAGGAAGAGTCAGAGCAATCACATTCTCAAAACAACAATAGAACAGTTCCATATGTTTAG 1620 0.4549 MAREQIQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAAKPGTLPPNVSAAVNGVAFCGTLSGQLFFGWLGDKMGRKKVYGMTLMLMVICSIGSGLSFGHSAKSVIATLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGIFAIIISVAFKERFDAPPYELDPAGSTVPQADYIWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNTKQAAADMSKVLQVEIQAEPQKEEQKANSYGLFSKDFLSRHGLHLLGTASTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKTMNAVEEVYRIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYDHWTHKDNRIGFVVIYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAIVGAFGFLYLAQNKDKSKADAGYPAGIGVKNALIVLGVVNILGFFFTFLVPEANGKSLEEMSGENDEDVGTQEESEQSHSQNNNRTVPYV* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1363 539 Pfam Sugar (and other) transporter 26 511 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gso19g1363 539 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 504 IPR020846 GO:0022857
Gso19g1363 539 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-7-RELATED 1 522 - -
Gso19g1363 539 SUPERFAMILY MFS general substrate transporter 12 511 IPR036259 -
Gso19g1363 539 MobiDBLite consensus disorder prediction 524 539 - -
Gso19g1363 539 MobiDBLite consensus disorder prediction 508 539 - -
Gso19g1363 539 Gene3D MFS general substrate transporter like domains 20 528 IPR036259 -
Gso19g1363 539 TIGRFAM 2A0109: phosphate:H+ symporter 11 513 IPR004738 GO:0005315|GO:0006817|GO:0016021
Gso19g1363 539 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 522 - -
Gso19g1363 539 CDD MFS_PhT 25 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1363 Gso-Chr19 42439775 42442753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1363 1 517 Inorganic Solute Cotransporters AT3G54700 84.139 0.0 922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1363 K08176 - gmx:100803626 1076.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1363 19 42439775 42442753 Gso3g1368 3 39623654 39626954 GST
Gso19g1363 19 42439775 42442753 Gso2g0052 2 628342 632949 PCT
Gso19g1363 19 42439775 42442753 Gso10g0060 10 677842 681393 PCT
Gso10g0311 10 3317290 3320471 Gso19g1363 19 42439775 42442753 PCT