Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1349 ATGATTGAGAACATACTTCTGAATTTGCAGCTTTTAGCACCTTTCTTCCTCTTATTCATCTTCCCAGTGCTTCTGTTCTTCTTTTTCTCGTCTTCAGGTTCCAAAAAGAAAGAGGCAAGCATAACCACCATCCCAAAGCCATACCCACTTATTGGTCACTACTTAGACCTCAAAGGCGTCGGTAACCGCCGTATCCAGTGGCTATCCGATATCGTCAAAATCTCACCGGCCGCCACTTTCACCCTCCACCGCCCCTTGGGCAGCCGCCAAGTCATCACCGGCAACCCCGCCACCGTAGAGCACATTCTCAAGACCCGTTTCTCCAACTATATAAAGGGCTCCATCTTTATTAACAACCTCTCCGATTTCCTCGGCACCGGAATCTTCAACGCCGACGGCAACACTTGGAAGTTTCAGAGGCAAGTCGCCAGCCACGAATTCAACACTAAGTCTCTCCGCAAATTCGTCGAACACGTGGTTGATGTCGAACTCTCCGACCGTCTCGTCCCCGTCCTCGCTTCAGCAGCACAACAAGACCAAACCCTCGATTTCCAAGACATCCTCCAACGTTTCGCGTTCGACAACATCTGCAAAATCGCGTTCGGGTATGACGCCGAGTACCTGACGCCGTCAACTGAACAGAGTAAGTTCGCAGTAGCGTACGAAGAAGCGACGGAGATCAGCAGCAAACGGTTCCGCGAGCCGTTACCGTTAGTGTGGAAAATCAAGAGATTGCTTAACATAGGTTCGGAAAAGAGACTAAGAATAGCGGTGAAAGAAGTGCGCGATTTCGCGAAGAAGATAGTGAGAGAGAAGAAAAAGGAGCTGAAGGAGAAGGAATCTCTTGAACAGGTTGACATGCTATCGCGGTTCTTAAGTTCGGGGCACTCCGACGAGGACTTCGTCACTGACATAGTTATAAGCTTCATATTGGCGGGGAAGGATACCACGTCAGCTGCGCTGATGTGGTTTTTCTGGCTACTATCGAAGAACCCGGGCGTGGAGAAGGAGGTTTTGAAGGAGATAATGGAGAAACCAGAGACTCCGGCGTACGATGAAGTGAAGGACATGGTTTACATCCATGCAGCGTTGTGTGAGAGCATGAGGCTCTACCCTCCGGTGTCGATGGACTCGAAGGAAGCAGTGGACGACGACGTTTTGCCGGATGGGACGGTGGTGAAGAAAGGGACGTTGGTGACGTATCACGTGTATGCGATGGGGAGGATGGAGAGTATTTGGGGCGAGGATTGGGCGGAGTTTAAGCCAGAAAGATGGTTGGAGAAGGTTGAAACGGGAAAGTGGAAGTTTGTGGGAAGGGATTCGTTCACTTATCCGGTGTTTCAGGCTGGTCCCAGGATTTGTTTGGGGAAGGAAATGGCATTTATGCAGATGAAGAGGTTGGTGGCTGGGATTCTGAGGCGCTTCACGGTGGTTCCGGCAATGGCTAAAGGGGTGGAGCCTCACTACTTTGCCTTCTTGACCTCCCAGATGGAAGGTGGATTCCCCGTCAAGATCATCGACAGGGAAGCTTCATGTTGA 1539 0.5075 MIENILLNLQLLAPFFLLFIFPVLLFFFFSSSGSKKKEASITTIPKPYPLIGHYLDLKGVGNRRIQWLSDIVKISPAATFTLHRPLGSRQVITGNPATVEHILKTRFSNYIKGSIFINNLSDFLGTGIFNADGNTWKFQRQVASHEFNTKSLRKFVEHVVDVELSDRLVPVLASAAQQDQTLDFQDILQRFAFDNICKIAFGYDAEYLTPSTEQSKFAVAYEEATEISSKRFREPLPLVWKIKRLLNIGSEKRLRIAVKEVRDFAKKIVREKKKELKEKESLEQVDMLSRFLSSGHSDEDFVTDIVISFILAGKDTTSAALMWFFWLLSKNPGVEKEVLKEIMEKPETPAYDEVKDMVYIHAALCESMRLYPPVSMDSKEAVDDDVLPDGTVVKKGTLVTYHVYAMGRMESIWGEDWAEFKPERWLEKVETGKWKFVGRDSFTYPVFQAGPRICLGKEMAFMQMKRLVAGILRRFTVVPAMAKGVEPHYFAFLTSQMEGGFPVKIIDREASC* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1349 512 PANTHER CYTOCHROME P450 94A2-LIKE 16 506 - -
Gso19g1349 512 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1349 512 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1349 512 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1349 512 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1349 512 Coils Coil 262 285 - -
Gso19g1349 512 Gene3D Cytochrome P450 25 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1349 512 SUPERFAMILY Cytochrome P450 45 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1349 512 Pfam Cytochrome P450 45 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1349 512 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1349 512 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1349 512 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1349 512 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1349 512 PANTHER CYTOCHROME P450 16 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1349 Gso-Chr19 42190387 42192230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1349 17 509 Cytochrome P450 AT5G63450 47.800 1.75e-156 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1349 K20769 K13407 gmx:100795308 947.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1349 19 42190387 42192230 Gso3g1350 3 39395959 39397760 GST