Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1258 ATGGCTGGCAGTAACCAGGTCAATCTCAATGAATCTAGGAGTGTTGTTCCGTTAAATACATGGGTGCTTATTTCCAATTTCAAGCTGTCTTACAAGCTTCTCAGACGTGACGATGGAACGTTCAATCGTGAGTTGGCGGAGTTTCTGGATAGGAAGGTCCCCGCGAACGCAATTCCTGTTGAAGGGGTGTTTTCAATCGATTATGTTGATAGAAACGCGGGTTTGTTTTACCGTGTGTACTTGCCAGCCTCTGGAAACGAGGCTCAATGGGGTATCAAAGACCTTGAGAAGCCGTTGAGTACTACAGAAATTGTTCCTGTGATCATATTCTTCCACGGGGGAAGCTTTTCGCATTCCTCGGCCAACAGTGCCATCTACGACACCTTCTGCCGGCGCCTTGTGAGGATTTGCAGGGCTGCTGTGGTGTCTGTGAACTACCGGCGATCACCGGAGCACCGGTATCCTTGCGCCTACGACGACGGCTGGGCGGCACTGAGGTGGGTGAAGTCGAGAGCATGGCTGCAAAGTGGGAGGGAGTCCAAGGTTCATGTCTACTTGGCAGGGGACAGTTCTGGAGGGAACATTGTTCATCATGTGGCAGTGATGGCTGCAGAGGAGGAAATTGAGGTCCTGGGGAATATTCTTCTCCACCCTTTGTTTGGTGGGGAGAAGAGAACGGAATCAGAGTTGAGATTGGATGGGAAATACTTTGTGAGGCTGAAGGATCGTGATTGGTATTGGAGGGCTTTTCTACCTGAAGGAGAGAATAGAGACCACCCTGCTTGCAACCCTTTTGGACCAAGGGGGAGAAGCATTGCAGGACTCAAATTCCCCAAAAGTTTAGTTTGTGTGGCTGGTTTGGATCTTCTGCAGGATTGGCAATTGGCATATGCAAAAGGTCTTCAGGATTCTGGACAACAGGTCAAGCTTCTTTTTCTCAAGGAAGCCACTATTGGCTTTTACTTCCTACCAAACAATGACCATTTCTATTGCCTCATGACAGAAATCAACAACTTTGTCAATTCTGATTCTGACTGTTAA 1041 0.4832 MAGSNQVNLNESRSVVPLNTWVLISNFKLSYKLLRRDDGTFNRELAEFLDRKVPANAIPVEGVFSIDYVDRNAGLFYRVYLPASGNEAQWGIKDLEKPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVRICRAAVVSVNYRRSPEHRYPCAYDDGWAALRWVKSRAWLQSGRESKVHVYLAGDSSGGNIVHHVAVMAAEEEIEVLGNILLHPLFGGEKRTESELRLDGKYFVRLKDRDWYWRAFLPEGENRDHPACNPFGPRGRSIAGLKFPKSLVCVAGLDLLQDWQLAYAKGLQDSGQQVKLLFLKEATIGFYFLPNNDHFYCLMTEINNFVNSDSDC* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1258 346 PANTHER ARYLACETAMIDE DEACETYLASE 2 341 - -
Gso19g1258 346 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Gso19g1258 346 PANTHER GIBBERELLIN RECEPTOR GID1C-LIKE PROTEIN 2 341 - -
Gso19g1258 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Gso19g1258 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Gso19g1258 346 Gene3D alpha/beta hydrolase 1 342 IPR029058 -
Gso19g1258 346 SUPERFAMILY alpha/beta-Hydrolases 59 340 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1258 Gso-Chr19 41136414 41139002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1258 1 345 Carbohydrate Esterase AT3G63010 73.121 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1258 K14493 - gmx:100788435 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1258 19 41136414 41139002 Gso3g1258 3 38266824 38269433 GST
Gso19g1258 19 41136414 41139002 Gso2g1252 2 15560351 15563035 PCT
Gso19g1258 19 41136414 41139002 Gso10g0200 10 2085216 2087981 PCT
Gso2g1252 2 15560351 15563035 Gso19g1258 19 41136414 41139002 PCT
Gso10g0200 10 2085216 2087981 Gso19g1258 19 41136414 41139002 PCT