Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1235 ATGAGGATCCGGAAAAGGCCGGTGCTTTTCCCTTCTTGGCTCTCGCCGTTGCGTCTCTCAGATCCCCACCTGATCAACCGGTCACCGGTGGTGGTGCAACTAAGCGACGCTACTTCCACCGCACCGAAACTTTCTTCTTCTGCTGCTGCAGTGTTCCCTCACCATGCTGCTTCCGCGCCTCCGTCGAGCTTGGATCGTTGCCAGCCGTCTGATCAGCCTCTCCCTTCGATCGGGAAACGAAGCAACGGCTCTGATGATCCCTCCGGCATCGGTGAAAGTGGGGCACACGGACAGCACAACAAGCAAGACCCTTTGGACGAGGTTGTTAGAAGGGAAGGTGAGAGTGGGGAAGACTCGGGAGAGAAGGGTAATCATAGCAGAAAAGGACGCTCTTTTGGTTCGGAAAAAACACAAGCTGAGTTGTTGCCACCGTTAAGCCCTTCTTCTACTCAAGATGGGAGATGGTACGAGGGAGAGAAGGCGATTCCGCTGAAGAAAAGGAGAGGGAACTTCGAGGAGAATAATAAGAATAATGCTGCTACTCATAGCAAGAAGATGAAGGCGAAGATGAAGACGAAGATGAACAAGAAATGTTCGACGCGCAACAAGGAGGATAGCATGGGAGAGGAATTAGACGAGGAAGATGAAGAAGAGAAGAAGGTAGAAGAAACAAAAGCGGAAGTGAATATTGTGAGTAAAAAGAGAGCAAGGGGTAGTGCACTCATGGAAGGTTCTAGGTGCAGTCGTGTGAATGGGAGAGGGTGGAGGTGCTGCCAACAAACGCTGGTTGGTTACTCGCTGTGTGAGCATCACTTGGGGAAGGGAAGGCTCAGAAGCATGACAAGTGTTAGAAGCCGTTCCATTGCTTCAACTGCACCAAAGGAGGTGCACGTGCACCACTTGCCTGACCCATCTTCTTCTTCTTCTTCTCCTCCTCCTTCTTTTTGTTCTCTTGATCATGAGAAGCAAATTGAGTGTGTTGATAATGCTGAGCCCTTTGGGGATGAGGAGAAGAAGCCAGAGATAATAATGACGAAGAAGAGGATGAAGCTTGGCATGGTGAAAGCCCGTTCCATAAGCAGCTTGCTGGGGCAAACAAACACCCAGATTGCTGCTGTAGCTCATGAGAATAGCAAGTAA 1140 0.5018 MRIRKRPVLFPSWLSPLRLSDPHLINRSPVVVQLSDATSTAPKLSSSAAAVFPHHAASAPPSSLDRCQPSDQPLPSIGKRSNGSDDPSGIGESGAHGQHNKQDPLDEVVRREGESGEDSGEKGNHSRKGRSFGSEKTQAELLPPLSPSSTQDGRWYEGEKAIPLKKRRGNFEENNKNNAATHSKKMKAKMKTKMNKKCSTRNKEDSMGEELDEEDEEEKKVEETKAEVNIVSKKRARGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRSRSIASTAPKEVHVHHLPDPSSSSSSPPPSFCSLDHEKQIECVDNAEPFGDEEKKPEIIMTKKRMKLGMVKARSISSLLGQTNTQIAAVAHENSK* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1235 379 MobiDBLite consensus disorder prediction 99 134 - -
Gso19g1235 379 MobiDBLite consensus disorder prediction 63 88 - -
Gso19g1235 379 MobiDBLite consensus disorder prediction 182 196 - -
Gso19g1235 379 PANTHER OS02G0773600 PROTEIN 28 377 - -
Gso19g1235 379 Coils Coil 207 234 - -
Gso19g1235 379 MobiDBLite consensus disorder prediction 158 173 - -
Gso19g1235 379 MobiDBLite consensus disorder prediction 285 315 - -
Gso19g1235 379 MobiDBLite consensus disorder prediction 56 223 - -
Gso19g1235 379 Pfam WRC 243 283 IPR014977 -
Gso19g1235 379 PANTHER - 28 377 IPR031137 GO:0005634|GO:0006351|GO:0032502
Gso19g1235 379 ProSiteProfiles WRC domain profile. 241 285 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1235 Gso-Chr19 40831889 40834459 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1235 - - gmx:100810559 671.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1235 19 40831889 40834459 Gso3g1232 3 37968482 37971161 GST
Gso19g1235 19 40831889 40834459 Gso2g1461 2 28813371 28816298 PCT
Gso2g1461 2 28813371 28816298 Gso19g1235 19 40831889 40834459 PCT