Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1219 ATGAACGAGAACAAAATTGATTGGGGAGGATTGATTCAACAAAGTCATGGACTAAGTGGGGATTTTAATTCTGAGTTTGGCAATCGTTACTGTCAATATTTTGATATCAGACAAGCTTGGAATATGGGACCACTTTCAATGTTTGGAGGAGAAGCCACAGATCATGAGTTACCAAACATTGGCCATGTCAAATCATCTGGCACCATTATGAGCCGTTTTGAGTCACCAGCTTCTGCCTTTTATGCTACAGAAAACTGCATGGGATTTGCAGAATATGATTGCCAAGTTGGTGTTCACTCTTTGAGCTCTCAGTTATGTAAGATTAATGATTTGGAATTCCCTTTGTATCAATCTTTTTCCAGGGAAAATCTTTTCTTGGATTCAGCAAACCAATCTGAAACCAACTTTGATTTATCAAACACTTTGCAATCCATAGTTAAATCTCAACTGAATAGTGGCAATCAATGCCGTAGATCCCCTGAAAAGTCTAATCAAATTTCAAGTGGGAATTTTCCCAGTTCCAAGTTCCTTCCAATAGAACAACAGAAGTTGTTCGTTGATGGTCTTATCAGGGGCTCATCATTTCTGAAAAAAGGAAATCAAGACCATATGGTTGGTCATGGATCTTTCAATTTATCTGTTCCACAACTGAGATTCTCTTCTCAGATTGAGAAGTTGTATCCAACACTTTCAGCAGGAAGTGTGTCTACTATTGGAAACTCTGCTTCTAATGGGGCAATAGTGTCAAGTAAAACACGTATAAGATGGACTAAGGATCTTCATGAAAAGTTTGTCGAGTGTGTGAATCGCCTTGGAGGCGCTGAGCAGGCAACACCAAAAGCTATATTAAAGATGATGAACACAGATGGTTTGACTATCTTCCATGTCAAAAGTCATTTGCAGAAATATAGAATTGCGAAATTCATTCCAGAGCCCAGTCACGGGAAATCTGACAAAAGAACCCACACAAAGGATGTGCATCATCTTGATGTCAAAACTGGCTTACAAATTAGAGAGGCGCTTAAGCTGCAATTAGATGCTCAAAGGCGTCTTCATGAACAATTAGAGATTCAGAGAAAATTACAGTTGCGAATTGAGGAACAAGGAAGGGAACTAAAAAAAATGTTTGACCAGCAGCAAAAGACTAATAATAACCTCCCGAATACTCAGAATTCAGCCACTGATGAGACAACAATTAATCATTAA 1206 0.3856 MNENKIDWGGLIQQSHGLSGDFNSEFGNRYCQYFDIRQAWNMGPLSMFGGEATDHELPNIGHVKSSGTIMSRFESPASAFYATENCMGFAEYDCQVGVHSLSSQLCKINDLEFPLYQSFSRENLFLDSANQSETNFDLSNTLQSIVKSQLNSGNQCRRSPEKSNQISSGNFPSSKFLPIEQQKLFVDGLIRGSSFLKKGNQDHMVGHGSFNLSVPQLRFSSQIEKLYPTLSAGSVSTIGNSASNGAIVSSKTRIRWTKDLHEKFVECVNRLGGAEQATPKAILKMMNTDGLTIFHVKSHLQKYRIAKFIPEPSHGKSDKRTHTKDVHHLDVKTGLQIREALKLQLDAQRRLHEQLEIQRKLQLRIEEQGRELKKMFDQQQKTNNNLPNTQNSATDETTINH* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1219 401 Pfam Myb-like DNA-binding domain 255 304 IPR001005 -
Gso19g1219 401 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 250 308 IPR017930 -
Gso19g1219 401 MobiDBLite consensus disorder prediction 378 401 - -
Gso19g1219 401 Coils Coil 338 358 - -
Gso19g1219 401 MobiDBLite consensus disorder prediction 153 174 - -
Gso19g1219 401 SUPERFAMILY Homeodomain-like 249 305 IPR009057 -
Gso19g1219 401 Pfam MYB-CC type transfactor, LHEQLE motif 335 382 IPR025756 -
Gso19g1219 401 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 38 401 - -
Gso19g1219 401 Gene3D - 250 309 - -
Gso19g1219 401 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 38 401 IPR044848 GO:0003700
Gso19g1219 401 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 251 306 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1219 Gso-Chr19 40666585 40670851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1219 235 379 G2-like Transcription Factor Family AT4G28610 57.143 2.83e-50 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso19g1219 Myb_DNA-binding 8.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1219 - - gmx:100527766 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1219 19 40666585 40670851 Gso3g1216 3 37807152 37810675 GST