Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1201 ATGGCTTATCAAGTGTTGGTGATTTGTGTGGTCTCCAGCATAGTGTTTGCATACATAGTATGGAGAAAAGAAAGGAAGAAAAAGCTTCCACCGAGTCCAAAGGGCCTTCCCATCATTGGGCACCTCCACCTTGTGTCCCCAATACCCCACCAAGATTTTTACAAGCTCTCACTCCGCCATGGACCCATCATGCAACTTTTCCTCGGCTCAGTCCCTTGTGTGGTGGCTTCCACCGCGGAAGCCGCCAAAGAGTTCCTCAAAACCCACGAAATCAACTTCTCCAACCGCCCCGGCCAAAACGTCGCCGTTCAGTTCTTAACCTACGTGTTTGGCCCTTACGGACCCTCCGTGAAGTTCATCAAGAAACTTTGCATGTCCGAACTCCTCGGTGGGCGCATGCTGGACCAGTTCCTTCCTGTGAGACAGCAAGAGACAAAAAAATTCATCAAACGCGTCCTCCAAAAGGGTATCGCTGGTGAAGCCGTTGACTTCGGAGGAGAGTTCATGAGACTCTCCAACAACATCATTTCGAGAATGACCATGAACCAGACGAGTTCCGAGGACGAGAAACAGGCCGAAGAGATGAGGATGCTGGTGGCGGATGTCGCAGAACTCATGGGCACGTTCAACGTGTCGGACTTCATTTGGTTCTTGAAGCCTTTTGATTTGCAGGGGTTCAACAAGAGGATCAGGAAAACGAGGATCAGATTCGACGCTGTCTTGGACAGAATCATCAAGCAGCGTGAAGAGGAAAGAAGGAACAACAAGGAAATCGGTGGAACGCGTCAGTTTAAGGATATACTTGATGTTTTGTTGGACATAGGCGAAGATGACAGTTCTGAAATCAAATTAACCAAAGAGAACATTAAGGCCTTCATCATGGATATATTTGTTGCCGGGACTGACACGTCAGCTGCAACCATGGAATGGGCTATGGCAGAGTTAATCAACAATCCATGTGTGTTGGAGAAGGCAAGGCAAGAGATAGATGCAGTGGTTGGAAATAGTAGAATAATAGAAGAATCAGACATTGTCAACCTTCCTTACCTACAAGCCATTGTTAGAGAAACACTTAGGATTCACCCAGGTGGTCCATTGATTGTTAGAGAGTCATCAAAAAGTGTTGTGGTTTGTGGGTATGAAATTCCAGCCAAGACCCGATTATTTGTCAATGTTTGGGCTATTGGAAGGGACCCCAATCATTGGGAGAACCCATTTGAGTTTAGGCCGGAGAGGTTTTTTGAAAATGGACAAAGTCAATTGGATGTTAGGGGACAACATTATCATTTTATTCCATTCGGGAGTGGAAGAAGATCATGCCCTGGTACTTCTCTGGCATTGCAGATTGTGCATGTGAATCTGGCTATTATGATTCAGTGTTTTCAGTGGAAGTTTGATAATGGCAATAACAAGGTGGACATGGAAGAGAAGTCTGGCATCACTCTTCCGAGGGCTCACCCCATAATTTGTGTCCCTGTTCCAAGGCTTAACCCATTCCCTGTTATGTGA 1509 0.4632 MAYQVLVICVVSSIVFAYIVWRKERKKKLPPSPKGLPIIGHLHLVSPIPHQDFYKLSLRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVAVQFLTYVFGPYGPSVKFIKKLCMSELLGGRMLDQFLPVRQQETKKFIKRVLQKGIAGEAVDFGGEFMRLSNNIISRMTMNQTSSEDEKQAEEMRMLVADVAELMGTFNVSDFIWFLKPFDLQGFNKRIRKTRIRFDAVLDRIIKQREEERRNNKEIGGTRQFKDILDVLLDIGEDDSSEIKLTKENIKAFIMDIFVAGTDTSAATMEWAMAELINNPCVLEKARQEIDAVVGNSRIIEESDIVNLPYLQAIVRETLRIHPGGPLIVRESSKSVVVCGYEIPAKTRLFVNVWAIGRDPNHWENPFEFRPERFFENGQSQLDVRGQHYHFIPFGSGRRSCPGTSLALQIVHVNLAIMIQCFQWKFDNGNNKVDMEEKSGITLPRAHPIICVPVPRLNPFPVM* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1201 502 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 500 - -
Gso19g1201 502 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 500 - -
Gso19g1201 502 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1201 502 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1201 502 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1201 502 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1201 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Gso19g1201 502 Pfam Cytochrome P450 30 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1201 502 SUPERFAMILY Cytochrome P450 30 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1201 502 Gene3D Cytochrome P450 22 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1201 502 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1201 502 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1201 502 PRINTS E-class P450 group I signature 171 189 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1201 502 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1201 502 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1201 502 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1201 502 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1201 502 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1201 502 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1201 Gso-Chr19 40506746 40509124 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1201 5 495 Cytochrome P450 AT5G06900 49.098 2.43e-172 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1201 K24188 - gmx:100797067 975.696