Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1199 ATGGATGCTGCTGGTGCTACCCTTTTGTGTTACATCTTCTTCATAGCTTTGCTCATTTTCCCAATACTTTTCAAGTCCCTTGTCACACGAAGCACAAAGAAATTTCGACCACCACCAAGTCCACCAACACTTCCCATCATAGGCCACCTCCACCTTGTGGGCTCAGTCATACCAAAATCATTCCAAGCCCTAGCTCGCCTCTATGGCCCTCTCATTCAGCTCCGTTTAGGTGCCTCAACATGCGTAGTTGTCTCCAACGACCAAGTTGCCAAAGAAGTGATGAAAACCAACGACCTCAATTTCTGTTACCGACCCCACTTTGGATCCTCCGAGTACTTCTTGTACAAAGGCTCTGATTTTATCACCGCCCCATATGGCCCTTATTGGCGCTTCATCAAGAAGCTTTGCATGACGCAGCTTCTATCCAGCTCGCAGCTAGGGCGCTTCGTGCACGTCCGAGAGCAAGAAATTAATAAACTCTTGAAATCTGTTCTAGTGTGTTCCAGTGAAGGTAGGGTTATTGATTTGAGCTTTGAGCTCACTTCTTTGACCAACAATATCTTGTGCCGGATGGCTATGAGCACCAGCTGTTTGGATAGGGTTCATGATGCTGCTGAGATTCTTGACTTGGTGAGGGAGTTTTTGCATGCAGGAGCTAAGTTGAGCATGGGTGAGGTGTTGGGACCTTTGGGGAAGTTTGATTTGTTTGGGTATGGGAAGAAGCTTGTCAAAATAGTTGGCAAGTTTGATCAGGTTTTGGAGCGTATCATGGAGGAACACGAAGAGAAAAACACTGAGGTTCGTCGAGGAGAAACAGGGGACATGATGGATATTATGTTGCAAGTTTATAAAGATCCAAATGCTGAAGTGAGGTTAACAAGGAATCATATCAAGGCCTTCTTCCTAGATATTTTCCTAGCGGGAACAGAAACGTCTTCAGCAGCGTTGCAATGGGCAATGGCTGAGATGATGAACAAGGAAGGAGTGTTAAAAAGGGTGAAGGAAGAGATCGATGAAGTGGTGGGAACTAACAGGTTGGTTAGTGAATCAGACATTACAAATCTACGTTACCTCCAAGCTGTAGTGAAGGAAGTTTTAAGACTCCATCCAACGGCGCCGCTTGCTATAAGAGAATCAGCAGAGAACTGCAGCATCAACGGGTATGATATCAAGGGCCAGACACGAACACTCATCAATGTCTACGCCATCATGCGGGACCCAGAAGCGTGGCCCAACCCAGAGGAGTTTATGCCGGAGAGGTTCTTGGATGGGATCAACGCCGCTGATTTCAGCTATCTTCCGTTTGGGTTTGGCAGGAGGGGGTGCCCTGGATCTTCCCTTGCATTAACGCTCATACAAGTCACGCTTGCATCGCTTATCCAATGTTTTCAATGGAATATCAAAGCCGGAGAGAAGCTTTGTATGGAAGAAGCCTCATCCTTCTCTACAGGATTGGCAAAGCCTCTTCTTTGTTACCCTATAACTCGTTTTAATCCTTTTTAA 1503 0.4624 MDAAGATLLCYIFFIALLIFPILFKSLVTRSTKKFRPPPSPPTLPIIGHLHLVGSVIPKSFQALARLYGPLIQLRLGASTCVVVSNDQVAKEVMKTNDLNFCYRPHFGSSEYFLYKGSDFITAPYGPYWRFIKKLCMTQLLSSSQLGRFVHVREQEINKLLKSVLVCSSEGRVIDLSFELTSLTNNILCRMAMSTSCLDRVHDAAEILDLVREFLHAGAKLSMGEVLGPLGKFDLFGYGKKLVKIVGKFDQVLERIMEEHEEKNTEVRRGETGDMMDIMLQVYKDPNAEVRLTRNHIKAFFLDIFLAGTETSSAALQWAMAEMMNKEGVLKRVKEEIDEVVGTNRLVSESDITNLRYLQAVVKEVLRLHPTAPLAIRESAENCSINGYDIKGQTRTLINVYAIMRDPEAWPNPEEFMPERFLDGINAADFSYLPFGFGRRGCPGSSLALTLIQVTLASLIQCFQWNIKAGEKLCMEEASSFSTGLAKPLLCYPITRFNPF* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1199 500 PANTHER CYTOCHROME P450, FAMILY 712, SUBFAMILY A, POLYPEPTIDE 1 8 500 - -
Gso19g1199 500 SUPERFAMILY Cytochrome P450 31 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1199 500 Pfam Cytochrome P450 38 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1199 500 Gene3D Cytochrome P450 23 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1199 500 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1199 500 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1199 500 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1199 500 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1199 500 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1199 500 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1199 500 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1199 500 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1199 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Gso19g1199 500 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 500 - -
Gso19g1199 500 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1199 500 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1199 500 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g1199 500 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1199 Gso-Chr19 40498627 40500785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1199 12 500 Cytochrome P450 AT2G42250 49.605 8.80e-177 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1199 - - gmx:106794180 983.015