Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1196 ATGTCAACAATGCCAATGCACCATCTTCTCATTTCCTTCCTTATCTTCTCTCTCACTCCTACTCCGACAACCTCCCTCAACTCCGACGGCCTCTCCCTGCTTGCCCTGAAAGCCGCCGTGGACTCCGACCCCACCGGAGTTCTTTCCTCCTGGTCGGAAACCGACGGCACCCCATGCCACTGGCCGGGAGTCTCCTGCTCCGGCGACAAAGTAAGCCAAGTTTCCCTCCCAAACAAGACCCTGAGCGGTTACATCCCCTCCGAGCTGGGCTTCTTAACCTCCCTCAAAAGACTAAGCCTTCCCCACAACAACTTCTCAAACGCGATTCCCCCTTCTCTCTTCAACGCCACGTCACTCATCGTTCTCGACCTCTCTCATAACTCTCTCTCCGGTTCCCTCCCTACAGAGCTTCGCTCCCTCAAGTTCCTCCGCCACGTGGACTTATCCGATAACTCCCTCAACGGTTCCCTCCCCGAAACCCTCTCCGATCTCACCTCCCTCGCCGGAACCCTCAATCTTTCCTTCAACCACTTCTCCGGCGGGATTCCGGCGTCCCTCGGTAACCTTCCGGTGTCCGTCAGCCTTGACCTCCGCAACAACAACCTCACTGGGAAAATCCCACAGAAAGGGTCCCTTTTGAACCAGGGTCCCACCGCGTTTTCTGGTAACCCTGGATTGTGCGGGTTCCCGTTGCAGAGCGCTTGCCCTGAAGCGCAAAAGCCTGGAATTTTCGCGAACCCTGAAGATGGGTTCCCTCAGAACCCTAATGCGCTTCACCCTGATGGGAATGATCAGAGAGTGAAGCAGCACGGTGGCGGGTCTGTTGCTGTTCTTGTTATCTCCGGGCTCTCCGTAGCGGTTGGGGCGGTTTCGCTTTCTTTGTGGGTTTTCCGGCGACGGTGGGGCGGCGAGGAAGGGAAATTGGGAGGGCCAAAGTTAGAAAATGAAGTGGATGGGGGAGAGGGGCAAGAGGGTAAATTTGTTGTTGTGGATGAAGGGTTTGAGTTGGAGTTGGAGGATTTGCTGAGGGCGTCTGCGTATGTTATTGGGAAGAGCAGGAGTGGGATTGTGTACAAGGTTGTCGGTGTCGGAAAAGGGTCCTCCTCCGCGGCAGGGGCGGCGAATGTGGTGGCTGTTCGAAGACTCAGCGAGGGTGATGCCACGTGGCGGTTCAAGGAATTTGAGTCCGAGGTTGAGGCCATTGCCAGGGTTCGTCACCCCAATGTTGTACCTTTGAGAGCTTATTACTTTGCGCATGATGAGAAGCTGCTTATCACTGATTTCATTCGCAATGGAAGCTTGCACACTGCCTTACATGGTGGGCCTTCCAATTCATTGCCACCAATATCATGGGCAGCAAGGTTAAAAATAGCTCAAGAAGCAGCAAGGGGCTTGATGTATATACACGAGTTCAGTGGTCGAAAATATATCCATGGCAACATAAAGTCAACAAAAATATTGCTGGATGATGAGCTCCATCCATACGTGTCAGGTTTTGGACTTGCTCGGCTCGGTTTGGGCCCAACAAAGTCTACTACAATGGCACCAAAACGAAACAGCTTGAACCAGTCTTCTATAACAACTGCAATAAGTTCAAAGGTTGCAGCTTCCTCTAACCACTACTTGGCACCTGAGGTTCGCTTTACCGGTGGCAAGTTCACACAGAAATGTGATGTATATTCTTTTGGTATAGTGCTGTTAGAACTTTTGACAGGTAGGATGCCAGATTTTGGACCAGAAAATGATGATAAGGTACTAGAGAGTTTTGTAAGGAAAGCATTCAAGGAGGAGCAGCCATTGTCTGATATCATAGACCCAGCACTTATCCCTGAAGTTTATGCTAAGAAGCAAGTCATTGCTGCATTCCATATCGCTTTGAACTGCACTGAACTCGATCCAGAGTTGCGACCTAGAATGAAAACTGTGTCAGAAAGCCTTGATCACATCAAAATTTAG 1956 0.5118 MSTMPMHHLLISFLIFSLTPTPTTSLNSDGLSLLALKAAVDSDPTGVLSSWSETDGTPCHWPGVSCSGDKVSQVSLPNKTLSGYIPSELGFLTSLKRLSLPHNNFSNAIPPSLFNATSLIVLDLSHNSLSGSLPTELRSLKFLRHVDLSDNSLNGSLPETLSDLTSLAGTLNLSFNHFSGGIPASLGNLPVSVSLDLRNNNLTGKIPQKGSLLNQGPTAFSGNPGLCGFPLQSACPEAQKPGIFANPEDGFPQNPNALHPDGNDQRVKQHGGGSVAVLVISGLSVAVGAVSLSLWVFRRRWGGEEGKLGGPKLENEVDGGEGQEGKFVVVDEGFELELEDLLRASAYVIGKSRSGIVYKVVGVGKGSSSAAGAANVVAVRRLSEGDATWRFKEFESEVEAIARVRHPNVVPLRAYYFAHDEKLLITDFIRNGSLHTALHGGPSNSLPPISWAARLKIAQEAARGLMYIHEFSGRKYIHGNIKSTKILLDDELHPYVSGFGLARLGLGPTKSTTMAPKRNSLNQSSITTAISSKVAASSNHYLAPEVRFTGGKFTQKCDVYSFGIVLLELLTGRMPDFGPENDDKVLESFVRKAFKEEQPLSDIIDPALIPEVYAKKQVIAAFHIALNCTELDPELRPRMKTVSESLDHIKI* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1196 651 Gene3D Ribonuclease Inhibitor 170 237 IPR032675 -
Gso19g1196 651 Gene3D Phosphorylase Kinase; domain 1 327 428 - -
Gso19g1196 651 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Gso19g1196 651 Gene3D Transferase(Phosphotransferase) domain 1 429 651 - -
Gso19g1196 651 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 12 650 - -
Gso19g1196 651 Gene3D Ribonuclease Inhibitor 26 169 IPR032675 -
Gso19g1196 651 SUPERFAMILY Protein kinase-like (PK-like) 348 646 IPR011009 -
Gso19g1196 651 Pfam Protein tyrosine and serine/threonine kinase 349 646 IPR001245 GO:0004672|GO:0006468
Gso19g1196 651 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 650 - -
Gso19g1196 651 SUPERFAMILY L domain-like 29 232 - -
Gso19g1196 651 Pfam Leucine rich repeat 94 153 IPR001611 GO:0005515
Gso19g1196 651 ProSiteProfiles Protein kinase domain profile. 343 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1196 Gso-Chr19 40459437 40463223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1196 26 650 Receptor kinase-like Gene Family AT3G57830 59.155 0.0 732
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso19g1196 PK_Tyr_Ser-Thr 3.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1196 - - gmx:100796011 1218.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1196 19 40459437 40463223 Gso3g1197 3 37636099 37639894 GST