Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1168 ATGACTGAATTAGTCCTCTTCAGCATCGCGGAGTCACTCATAGCAAAGCTTGCTTCTCAAGCATATGAAGAAACTTCTCAGGTGCTGGGTTTATACCACCATCTGCAAGAGTTTACACAGACTCTCTCATTAGTCAAGGCTGTGCTGTTAGATGCTGAGGAAAAGCAGCAGCAGAACTATGAGTTGCAGGAATGGCTGAGGCAGGTCAAACATGTTTTCTCTGATGCTGAAAATGTGTTGGATGAATTTGAGTGTGAAACACTACGAAAGGAAGTGGTTCAAGCTCATGGCAGCGCCACAACCAAGGTAGCTCATTTTTTCTCAACTTCTAATCCACTTGTTTTTCGTTATAGATTGGCTCAACACATAAAAAAAATCAAGAAGAGATTAGACAAGGTTGCAGCAGACAGACATAAGTTTGGTCTTGAAACAACTGACATTGATCGACGTGTTGTGCATAGGAGGGATATGACATACTCCTACGTTGTTGATTCGGATGTGATAGGAAGGAATCATGATAAGGAAAATATTATACGACTTTTGGTGCAGCAGAATCCTAATAATAATGACAAAAGTCTCTCTGTAATTTCTATTGTGGGGATTCCAGGCTTGGGAAAGACCACACTAGCAAAGATTGTGTTCAATGATAGGAGGATACATGAGTTATTCCAGTTGAAGATGTGGGTTTGTGTGTCTAATGACTTTAACATTAAGCAAGTGGTTATTAAAATCCTTAATTCTAATAAGGATTCTGCTCACCAACAAAATTTAGACATGGTAGACATGGAGCAACTGCAAAGTCAATTAAGAAACAAACTTGCCAGTAAAAAATTCTTACTTGTCTTGGATGACGTATGGAATGAAGATCTTGTAAAATGGGTTGAGCTGAGGGATTTAATACAAGTAGATGCTACAGGAAGTAAAATTTTAGTGACTACACGCAGTCACGTGACTGCTTCCATGATGGGTACTGTTCCCTCTTACATTTTAGAAGGGCTTTCCTTGGAGGATTCGTTGTCTCTGTTTGTCAAATGGGCATTTAAAGAAGAAGAGAAAAGGAATTCCTATTTGGTAAATATTGGGAAAGAAATTGTGAAAAAATGCAATGGGGTTCCTTTGGCAGTGAGAACATTAGGAAGTTTACTGTTTTCAAAAGATAACAGAGAGGAATGGGAATTTGTGAGAGATAATGAAATTTGGAATTCAATGAAATCTGAAAGTGGTATGTTCGCTGCACTTAAATTAAGTTTTGATCAAATGCCATCCAATTTGAGGCGATGCTTTGCTTTGTTCAACCTTTACCCATGTGGGCATGCATTTGATAGTTTTGATGTTACATCCCTTTGGGGAGCACTTGGTTTTCTTCCATCACCAAATAGAAATCAAATATTGAAACACGGTGCAAATCAATATCTTTGTGAACTATTCTCAAGATCTTTTCTACAGGATTTTGTTGATTACGGCATTGGCTTTGGTTTTAAAATACATGATTTGGTGCATGATATTGCACGGTATTTGGGTAGAGATTCCATAATGGTAAGATACCCCTTTGTGTTTAGACCCGAAGAAAGGTATGTCCAGCATCTATCTTTTCCTGAAAACGTTGAAGTTGAAAATTTTCCCATCCACAAATTTGTAAGCGTGAGAACCATACTATTTCCTACCTCAGGAGTTGGAGCCAACAGTGAAGTGTTTTTGCTTAAATGCACATCACGGTGCAAACGCTTACGGTTTTTAGATTTAAGTGATTCTATGTACGAGGCTTTGCCTCCTTACATTGGCAAGTTGAAACATTTAAGATATCTCAGTCTTGAGAATAATAACAACTTAAAGAGGCTTCCTGATTCTCTTTGCAACCTCCTAAAGTTAGAAGTTTTGATACTTAGTGGATGTTCAGAACTTTTAACACTGCCAAATGGTTTAAGAAAGTTGATCAGTCTTCAACATTTGGAGATAACCACAAAGCTACGTGTTTTGCCAGAGGATGAGATTGCAAACTTGAGTTCTCTTCGGATTCTCAGAATCGAATTTTGCAACAATGTGGAATCTTTGTTTGAAGGGATTAAACTCCCTACTCTTAAAGTATTGTGTATTGCCAATTGCCAGAGTCTAAAGTCGTTGCCACTTGATATTGAACATTTTCCTGAATTAGAGACTTTGTTAGTTGACAACTGTGATGTGTTGGAATTTTCCAAGGAGCATAACAACCAAAATTCCAACTTGAGGCTGAAGATTGTAAATTTCATTTCATTGCCACAGTTGGTGACCTTGCCTCATTGGCTTCAAGGATCGAAGGACACATTGCAATACTTGTTAATTTCAAGCTGCAACAATCTTGTGGGGCTTCCTGAATGGCTATCAGCTATGACTTGTCTGAAAACACTGTGTGTCACAAGTTGTCCTAACATGTTGTCTCTCCCGGATGGCATCCATCGCCTAACCACCCTTGAACGATTGGAAATTGATGGATATCCTGAATCGCTCCAACACTTAACCATTGATGAACCGGAAGAAGTCAAGGAAGAGGTAGAAGAATTGGAGTAA 2544 0.3864 MTELVLFSIAESLIAKLASQAYEETSQVLGLYHHLQEFTQTLSLVKAVLLDAEEKQQQNYELQEWLRQVKHVFSDAENVLDEFECETLRKEVVQAHGSATTKVAHFFSTSNPLVFRYRLAQHIKKIKKRLDKVAADRHKFGLETTDIDRRVVHRRDMTYSYVVDSDVIGRNHDKENIIRLLVQQNPNNNDKSLSVISIVGIPGLGKTTLAKIVFNDRRIHELFQLKMWVCVSNDFNIKQVVIKILNSNKDSAHQQNLDMVDMEQLQSQLRNKLASKKFLLVLDDVWNEDLVKWVELRDLIQVDATGSKILVTTRSHVTASMMGTVPSYILEGLSLEDSLSLFVKWAFKEEEKRNSYLVNIGKEIVKKCNGVPLAVRTLGSLLFSKDNREEWEFVRDNEIWNSMKSESGMFAALKLSFDQMPSNLRRCFALFNLYPCGHAFDSFDVTSLWGALGFLPSPNRNQILKHGANQYLCELFSRSFLQDFVDYGIGFGFKIHDLVHDIARYLGRDSIMVRYPFVFRPEERYVQHLSFPENVEVENFPIHKFVSVRTILFPTSGVGANSEVFLLKCTSRCKRLRFLDLSDSMYEALPPYIGKLKHLRYLSLENNNNLKRLPDSLCNLLKLEVLILSGCSELLTLPNGLRKLISLQHLEITTKLRVLPEDEIANLSSLRILRIEFCNNVESLFEGIKLPTLKVLCIANCQSLKSLPLDIEHFPELETLLVDNCDVLEFSKEHNNQNSNLRLKIVNFISLPQLVTLPHWLQGSKDTLQYLLISSCNNLVGLPEWLSAMTCLKTLCVTSCPNMLSLPDGIHRLTTLERLEIDGYPESLQHLTIDEPEEVKEEVEELE* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1168 847 SUPERFAMILY L domain-like 494 823 - -
Gso19g1168 847 Gene3D - 10 130 - -
Gso19g1168 847 CDD RX-CC_like 8 134 IPR038005 -
Gso19g1168 847 Pfam NB-ARC domain 175 417 IPR002182 GO:0043531
Gso19g1168 847 PRINTS Disease resistance protein signature 195 210 - -
Gso19g1168 847 PRINTS Disease resistance protein signature 272 286 - -
Gso19g1168 847 PRINTS Disease resistance protein signature 368 382 - -
Gso19g1168 847 PRINTS Disease resistance protein signature 618 634 - -
Gso19g1168 847 Gene3D - 416 505 IPR036388 -
Gso19g1168 847 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 430 IPR027417 -
Gso19g1168 847 Pfam Rx N-terminal domain 11 98 IPR041118 -
Gso19g1168 847 PANTHER DISEASE RESISTANCE PROTEIN RP 6 777 IPR044974 GO:0006952
Gso19g1168 847 Gene3D - 149 326 IPR027417 -
Gso19g1168 847 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 777 - -
Gso19g1168 847 Gene3D Ribonuclease Inhibitor 531 845 IPR032675 -
Gso19g1168 847 Gene3D - 332 415 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1168 Gso-Chr19 40061207 40065674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1168 576 670 WRKY Transcription Factor Family AT4G12020 35.417 2.35e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1168 - - gmx:121174109 1657.11