Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1155 ATGGAGGATGGTTCAAGAAATAGGACTCATTTCAACATGACTTCACGAAAAGCCGAAGAAGCGGCTTGGAGACGCTATGAGGCCACTCAGTGGCTAGAAAGTCAAGTGGGTCCTCTTGGTATATCAAACCAGCCTACTGAGAGAGAACTGATTTCTTGCTTGAGAAATGGTCTGATTCTTTGCAATGCCATTAACAAGATTCATCCAGGAGCAGTGCCTAAGGTTGTGGTTGTGGACAATCAAGTGCCTTCACAATCACTTACCTGGGATTCACAGCCTTTGCCTGCCTATCAGTATTTTGAAAATGTACGCAATTTTCTGTTTGCGATGGAAGAATTAAAGCTTCCAGCTTTTGAAGCTGCTGATCTTGAAAAGGATAATCTCGAGATGGGATCGGCAGCAAAAGTGGTTGATTGCATTTTGGCACTTAAATCGTTTCAAGAGTTGAAGCAGATGAACAATCAGAATGGATACATTAAACACATAAAATCTCCTTTGCCTATGAGAATGCATACAAGAGCAGCTGCGTTCTCCTCTGATGCTTGTAGGCACTTGGATTTGTCTTCCAAATTGGAAAAAATGCCTCCCGCTGAGTGTAATTTTCCGAAAAGAGAAGAAATTGTGGAATTACTTGCCAAGCAACTGGTTGACCGTATGTTTGATGCCAAAGAAAATATCGATGGAAACATTATTGCTTCTCTCCGTAAAGAACACCTGGTAGCGGATCCAATAAAGGTATTTAATCAGATAATGGCATGTTGTAATGGGGAACAGCCACCTACAAAGTTCAATGAGTTGCCATTGCTTCCAAAGGATTCTGCAAAAGAAAAGGATAACTTACCACCTCATTCCACTTCAACACCTATGCAATCAGATGCTTTATCTGCTCCTGACAGTTCTAAGCATTGCCAAGCTTGCCCCAGAAAGTGCAAGTGCAATCAGGTGCATCTTTTAGACAGGCAGGAAAAAGAACTACTGGATCTCAAGGCTTTGAAGTTGAAAATTAAGAAAGAGTTTGAAGAGATGCAGTCACAGTTTCAAGGATTTTTTAATGATATTGGGAGTCAAATACAGGAGATGTCAACTAAAGCTCTTGGATATCACAAAGTAGTAGAAGAGAATAGGAAACTATACAACATGGTTCAAGATTTGAAAGGTAATATTCGAGTTTACTGCAGAATCAGGCCCTCATTCCGGGCTGAATCCAAGAATGTTGTTGATTTCATTGGGGAAGATGGTTATCTATTCATTTTAGATCCAACAAAAACACTAAAAGATGGAAGGAAAGTATTTCAGTTTAATCGGGTTTTTGGTCCAACAGCTGACCAAGATGAGGTTTATAAGGATACTCAACCATTAATTAGATCTGTGATGGATGGGTACAATGTTTGTATTTTTGCTTATGGTCAAACTGGATCGGGGAAGACTTACACCATGAGTGGTCCTTCAGGTGGAGTGACATCAAAGGATATGGGAATCAATTATCTGGCACTACATGATTTGTTTCAAATGTCTAATGAAAGGAAGGACATCATAAGCTATGATATTTATGTGCAAATGGTTGAGATTTACAATGAACAAGTTAGAGACTTACTTGCAGAGGACAAAACAGACAACAAATTAGAAATCCGGAGCTGCAATGATGACGGGTTGAGCCTTCCTGATGCTAGATTGCATTTGGTGAAGTCTCCAACTGATGTTCTGACCCTCATGAAACTTGGTGAGGTTAATCGTGCCGTCAGTTCGACTTCAATGAACAATAGGAGTAGTCGATCCCACAGTGTACTTACTGTGCATGTTAATGGTAAAGATACATCTGGGAGCTCCATTCGCAGCTGCTTGCACTTAGTAGACCTAGCTGGAAGTGAACGAGTTGACAAGTCTGAAGTTACAGGGGAAAGACTAAAGGAAGCACAATTTATTAACAAGTCTCTTTCCTGTTTGGGAGATGTGATCACAGCCCTGGCTCAAAAGAATTCTCACATCCCTTATAGGAACAGCAAACTCACACTTCTTTTGCAGGACTCCTTAGGTGGACATGCTAAAACATTGATGTTTGCTCATGTGAGTCCGGAAGCAGATTCATTTGGTGAAACAGTGAGTACTCTAAAGTTTGCTCAGCGGGTTTCCACTGTGGAACTGGGGGCAGCCCGTATGAACAAAGAAAGCAGCGAGGTTATGCATCTTAAAGAACAGGTTGAGAACCTTAAGATTGCATTGGCAACCAAGGAAGCTCAGAGAGTAATGTTCCAAAGAATTAAAGAACCACACACTCCATTAGAGAAGCCAAGACTGGTGTCTGAGAAAACTCCATTGCGCCCACGAAGACTTAGCATTGAGAACTGCAGCGCTGTAAAGACTGATAAATCCGTGAATCATGAGGATAGAAGTGGAGCCAAATCACCACTTTTGTTACCTCGTTCGAGAAGATTAAGTTTGGAAGGAGGTTCAAAAACTATCAAGAAAGATAGTCTACCAAAAGTATCAGATGATACAGTAAGCAAAGCTTTACAGTACGAGTCAGTGTCTCGACAGAAATATCACCCAATGCAAGATCCAGAATCAGTATCAAAACTAAACGGCCATTTCAGCAGTGGCAATTCCAGGTCAGAGTTGCATACCAGAACCCCTCGAAGTCCTACAAGCATTTCCTATCAAACGAGATTGATAAAAGTAAAAGGTGGGATGCAAGTTCATCCTCTTAAACTGCCTCAAACACCTGAACCACCAGTGCTGGATGGAAATGATGCACATGGCACGAAGGTGATGGGTAGCACAAATGGAAAAGGATCCCAGATAAGAAAATCCTTGAGAACAATTGGGAAACTGATAAATGGCCCTGATAAGAGGAGCCAACAAAATAATATGGTTGAAGTCAAGTCACCCATCAAGGGCACTGGTCATACAAATCATGTAAAATCACCAATTTCAGCTGCTGAGAAAACTAAAAAGAGGCAATCTCTAACGGGGACTCAACCACCACTGTCAAATAACTCCCGTAGATCTTCACTTGGAGGGAAGCCAGTAGTAGCATATGACAAGGACGGAAATGCTAGAACTCCTCCTTCCCATTCAGACACCAAGACTGCAAAACGGTGGCTGTAG 3105 0.4158 MEDGSRNRTHFNMTSRKAEEAAWRRYEATQWLESQVGPLGISNQPTERELISCLRNGLILCNAINKIHPGAVPKVVVVDNQVPSQSLTWDSQPLPAYQYFENVRNFLFAMEELKLPAFEAADLEKDNLEMGSAAKVVDCILALKSFQELKQMNNQNGYIKHIKSPLPMRMHTRAAAFSSDACRHLDLSSKLEKMPPAECNFPKREEIVELLAKQLVDRMFDAKENIDGNIIASLRKEHLVADPIKVFNQIMACCNGEQPPTKFNELPLLPKDSAKEKDNLPPHSTSTPMQSDALSAPDSSKHCQACPRKCKCNQVHLLDRQEKELLDLKALKLKIKKEFEEMQSQFQGFFNDIGSQIQEMSTKALGYHKVVEENRKLYNMVQDLKGNIRVYCRIRPSFRAESKNVVDFIGEDGYLFILDPTKTLKDGRKVFQFNRVFGPTADQDEVYKDTQPLIRSVMDGYNVCIFAYGQTGSGKTYTMSGPSGGVTSKDMGINYLALHDLFQMSNERKDIISYDIYVQMVEIYNEQVRDLLAEDKTDNKLEIRSCNDDGLSLPDARLHLVKSPTDVLTLMKLGEVNRAVSSTSMNNRSSRSHSVLTVHVNGKDTSGSSIRSCLHLVDLAGSERVDKSEVTGERLKEAQFINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPEADSFGETVSTLKFAQRVSTVELGAARMNKESSEVMHLKEQVENLKIALATKEAQRVMFQRIKEPHTPLEKPRLVSEKTPLRPRRLSIENCSAVKTDKSVNHEDRSGAKSPLLLPRSRRLSLEGGSKTIKKDSLPKVSDDTVSKALQYESVSRQKYHPMQDPESVSKLNGHFSSGNSRSELHTRTPRSPTSISYQTRLIKVKGGMQVHPLKLPQTPEPPVLDGNDAHGTKVMGSTNGKGSQIRKSLRTIGKLINGPDKRSQQNNMVEVKSPIKGTGHTNHVKSPISAAEKTKKRQSLTGTQPPLSNNSRRSSLGGKPVVAYDKDGNARTPPSHSDTKTAKRWL* 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1155 1034 MobiDBLite consensus disorder prediction 967 1004 - -
Gso19g1155 1034 Gene3D Kinesin motor domain 329 714 IPR036961 -
Gso19g1155 1034 MobiDBLite consensus disorder prediction 1019 1034 - -
Gso19g1155 1034 MobiDBLite consensus disorder prediction 280 298 - -
Gso19g1155 1034 MobiDBLite consensus disorder prediction 857 881 - -
Gso19g1155 1034 Coils Coil 719 746 - -
Gso19g1155 1034 MobiDBLite consensus disorder prediction 783 804 - -
Gso19g1155 1034 Gene3D - 11 166 IPR036872 -
Gso19g1155 1034 MobiDBLite consensus disorder prediction 840 881 - -
Gso19g1155 1034 PANTHER KINESIN-LIKE PROTEIN KLP-3 8 1021 - -
Gso19g1155 1034 Coils Coil 318 338 - -
Gso19g1155 1034 Pfam Kinesin motor domain 414 711 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso19g1155 1034 ProSiteProfiles Calponin homology (CH) domain profile. 22 148 IPR001715 GO:0005515
Gso19g1155 1034 SUPERFAMILY Calponin-homology domain, CH-domain 21 161 IPR036872 -
Gso19g1155 1034 PRINTS Kinesin heavy chain signature 460 481 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso19g1155 1034 PRINTS Kinesin heavy chain signature 583 600 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso19g1155 1034 PRINTS Kinesin heavy chain signature 613 631 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso19g1155 1034 PRINTS Kinesin heavy chain signature 662 683 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso19g1155 1034 MobiDBLite consensus disorder prediction 264 298 - -
Gso19g1155 1034 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 351 711 IPR027417 -
Gso19g1155 1034 Pfam Calponin homology (CH) domain 24 145 IPR001715 GO:0005515
Gso19g1155 1034 MobiDBLite consensus disorder prediction 961 1034 - -
Gso19g1155 1034 ProSiteProfiles Kinesin motor domain profile. 387 712 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso19g1155 1034 PANTHER KINESIN-LIKE PROTEIN KIN-14L 8 1021 - -
Gso19g1155 1034 SMART ch_5 24 146 IPR001715 GO:0005515
Gso19g1155 1034 SMART kinesin_4 385 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1155 Gso-Chr19 39787074 39799626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1155 317 712 Calmodulin-binding Proteins AT5G65930 40.547 6.62e-71 256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1155 19 39787074 39799626 Gso3g1155 3 36936057 36944056 GST