Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1151 ATGGCTGAATTATTTATCTTCAGCATCGCTGAGTCTCTCATAACAAAGCTTGCTTCTCATGCTTTCCAAGAAGCTTCTCGGGTGGTGGGTTTGTACGACCATCTCCGAGACCTTAAAAAGACTCTCTCATTAGTCAAGGCAGTGCTGTTAGATGCTGAGCAAAAGCAGGAGCATAACCATGAGCTGCAGGAATGGCTGAGGCAGCTCAAAAGTGTCTTCTATGACGCCGAAGATGTGTTGGATGAATTCGAATGCCAAACACTGCGAAAGCAAGTGCTCAAAGCTCATGGTACCATCAAAGACCAGGTAAGCCACTTCTTCTCAAGTTCTAATCCACTTGTTTTTCGTTCCAAGATGGCTCAACAAATCAAAGATGTCAGCAAGAGGCTAGACAAGGTTGCAGCTGATAGGCATAAGTTTGGTCTCCGAATAATTGATGTTGACACACGAGTTGTTCATAGGAGGGACACGAGTCGCATGACACACTCCCGTGTGAGTGACTCAGATGTGATAGGAAGGGAACATGATAAAGAAAAGATCATAGAGATTTTCATGCAGCAGAATCCCAACGATGACGATAAAAGTCTCTCTGTTATCCCCATTGTGGGGATTGGAGGCTTGGGAAAAACTACACTTGCAAAGTTTGTGTTTAATGATAAGAGGATAGATGAGTGTTTCAAATTGAAGATGTGGGTGTGTGTTTCTGATGACTTTGACATCAACCAACTCATTATCAAAATCATCAATTCTGTGAATGTTAACGATGCTCCTCTTCGCCAACAGAATTTAGACATGGTCGATCTGGAGCAATTACAAAATCAATTGACCAGCAAACTTGCCGGTCAAAAATTCTTACTTGTCTTGGATGACGTATGGAATAATGATCGTGTTAAATGGGTTGAGTTGAGGAATTTATTACAAGAAGGGGTTGCTGCAGGAAGTAAAATTCTAGTTACTACACGTATTGATTCCATTGCTTCCATGATGGGGACTGTTGCCTCTTACAAGTTACAAAACCTTTCTCCTGAGAATTCATTGTCTCTTTTTGTCAAATGGGCATTTAAAAACGAAGGCGAAGAGGAAAAACATCCCCATTTGGTAAATATCGGGAAAGAAATTGTGAAAAAATGCAGAGGGGTTCCATTGGCTGTGAGAACATTGGGGAGTTTACTATTTGCAAAGTTTGAGGCAAATGAGTGGGAATATGTGAGAGACAATGAAATTTGGAATTTGCCACAAAATAAAGATGACATTTTACCTGCACTTAAATTAAGTTATGATTTCTTCCCCTCCTATTTGAGGCAATGTTTTGCATTATTTTCACTTTACCCAAAGGATTATGAATTTCGTAGTGTTGAGGTAGCTAGGCTTTGGGAGGCACTTGGTGTCCTTGCACCACCAAGAAAGAATGAGACACCGGAAGATGTTGTCAAACAGTATCTGGATGAATTACTGTCAAGATCTTTCCTTCAAGATTTTATTGATGGTGGCACTATTTGTCAATTTAAAATTCATGATTTGGTGCATGATCTTGCTCTGTTTGTTGCAAAAGATGAGTGTCTACTTGTAAATTCCCACGTTCAAAATATTCCTGAGAATATTCGGCATCTGTCTTTTGCGGAATTCAGTTCTCTTGGAAATTCATTCACCTCAAAATCGGTAGCCGTGAGATCCATAATGTTTCCAAATGGTGCAGAAGGAGCCAACGTTGAAGCTTTGCTAAATACCTGTGTGTCAAAGTTCAAATTATTGCGAGTTTTGGATTTAAGAGATTCGACATGCAAGACTTTGCCACGTTCCATTGGTAAGTTGAAACACTTGAGATATTTCAGCATTCAGAATAATCCCAACATCAAGAGACTCCCCAATTCTATTTGCAAGCTCCAAAATTTGCAATTCTTTAGTGTGCTGGGATGCAAGGAGCTGGAAGCATTGCCCAAAGGATTCAGAAAATTGATTTGTCTTCGGCATTTGGGGATAAGTACAAAGCAACCTGTTTTGCCTTACAGTGAGATTACCAATTTGATCTCGCTTGCACATCTGTCTATTGGATCAAGCCATAATATGGAGTCTATCTTTGGAGGGGTGAAGTTCCCTGCTCTTAAAACATTGTATGTTGTTGACTGTCATAGTCTGAAGTCTTTGCCACTGGATGTTATAAATTGTCCTGAATTAGAATCTCTGAGTGTTCAAGATTGTGTTAATCTGGACTTAGATCTGTGGAAGGAACACCATGAAGAACAAAGCCCCATGTTGAAGTTAAAATGTGTCGGATTCGCGGGTTTACCACAGCTGGGGGCCTTACCTCAATGGCTTCAAGAAACTGCCAACTCCTTACGGACCTTGATTATTAAATATTGCGACAATCTTGAAATGCTTCCGGAGTGGCTGTCAACTATGACTAATCTGAAATCACTTCTTATATTAGATTGTCCAGAGCTTATATCTCTCCCGGATAACATCCATCACCTCACCGCACTTGAACATTTGCATATCAGAGGTTGCCCTGAATTATGCAAAAAATGCCAGCCCCATGTCGGTGAGTTTTGGTCCAAAATATCACATATCAAAGACGTCTTCATTAAAGAACCAGAAAAGCTGAAGGAAGAAGAAGACGAATAA 2622 0.4039 MAELFIFSIAESLITKLASHAFQEASRVVGLYDHLRDLKKTLSLVKAVLLDAEQKQEHNHELQEWLRQLKSVFYDAEDVLDEFECQTLRKQVLKAHGTIKDQVSHFFSSSNPLVFRSKMAQQIKDVSKRLDKVAADRHKFGLRIIDVDTRVVHRRDTSRMTHSRVSDSDVIGREHDKEKIIEIFMQQNPNDDDKSLSVIPIVGIGGLGKTTLAKFVFNDKRIDECFKLKMWVCVSDDFDINQLIIKIINSVNVNDAPLRQQNLDMVDLEQLQNQLTSKLAGQKFLLVLDDVWNNDRVKWVELRNLLQEGVAAGSKILVTTRIDSIASMMGTVASYKLQNLSPENSLSLFVKWAFKNEGEEEKHPHLVNIGKEIVKKCRGVPLAVRTLGSLLFAKFEANEWEYVRDNEIWNLPQNKDDILPALKLSYDFFPSYLRQCFALFSLYPKDYEFRSVEVARLWEALGVLAPPRKNETPEDVVKQYLDELLSRSFLQDFIDGGTICQFKIHDLVHDLALFVAKDECLLVNSHVQNIPENIRHLSFAEFSSLGNSFTSKSVAVRSIMFPNGAEGANVEALLNTCVSKFKLLRVLDLRDSTCKTLPRSIGKLKHLRYFSIQNNPNIKRLPNSICKLQNLQFFSVLGCKELEALPKGFRKLICLRHLGISTKQPVLPYSEITNLISLAHLSIGSSHNMESIFGGVKFPALKTLYVVDCHSLKSLPLDVINCPELESLSVQDCVNLDLDLWKEHHEEQSPMLKLKCVGFAGLPQLGALPQWLQETANSLRTLIIKYCDNLEMLPEWLSTMTNLKSLLILDCPELISLPDNIHHLTALEHLHIRGCPELCKKCQPHVGEFWSKISHIKDVFIKEPEKLKEEEDE* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1151 873 Gene3D Ribonuclease Inhibitor 564 864 IPR032675 -
Gso19g1151 873 CDD RX-CC_like 8 134 IPR038005 -
Gso19g1151 873 Gene3D - 153 334 IPR027417 -
Gso19g1151 873 PRINTS Disease resistance protein signature 198 213 - -
Gso19g1151 873 PRINTS Disease resistance protein signature 278 292 - -
Gso19g1151 873 PRINTS Disease resistance protein signature 377 391 - -
Gso19g1151 873 PRINTS Disease resistance protein signature 774 790 - -
Gso19g1151 873 Gene3D - 339 424 IPR042197 -
Gso19g1151 873 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 439 IPR027417 -
Gso19g1151 873 Coils Coil 35 55 - -
Gso19g1151 873 Gene3D - 425 513 IPR036388 -
Gso19g1151 873 SUPERFAMILY L domain-like 503 855 - -
Gso19g1151 873 PANTHER DISEASE RESISTANCE PROTEIN RP 6 792 IPR044974 GO:0006952
Gso19g1151 873 Pfam Rx N-terminal domain 11 101 IPR041118 -
Gso19g1151 873 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 792 - -
Gso19g1151 873 Pfam NB-ARC domain 174 427 IPR002182 GO:0043531
Gso19g1151 873 Gene3D - 10 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1151 Gso-Chr19 39749053 39752255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1151 597 681 WRKY Transcription Factor Family AT4G12020 38.372 3.45e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1151 - - gmx:100786131 1613.2