Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1139 ATGGCTGAATTATTTCTCTTCAGCATCGCTGAGTCTCTCATAACAAAGCTTGCTTCTCATGCTTTCCAAGAAGCTTCTCGGGTGGTGGGTTTGTACGACCATCTCCGAGACCTTAAAAAGACTCTCTCATTAGTCAAGGCAGTGCTGTTAGATGCTGAGCAAAAGCAGGAGCATAACCATGAGCTGCAGGAATGGCTGAGGCAGCTCAAAAGTGTCTTCTATGATGCCCAAAATGTGTTGGATGAATTTGAATGCCAAACACTGCGAAAGCAACTGCTCAAAGCTCATGGTACCATCAAAGACGAGGTAAGCCACTTCTTCTCAAGTTCTAATCCACTTGTTTTTCGTTCCAAGATGGCTCAACAAATCAAAGATGTCAGCAAGAGGCTAGACAAGGTTGCAGCTGATAGGCATAAGTTTGGTCTCCGAATAATTGATGTTGACACACGAGTTGTTCATAGCAGAGACACGAGTCGCATGACACACTCCCGTGTGAGTGACTCAGATGTGATCGGAAGGGAACATGATAAAGAAAAGATCATAGAGCTTTTGATGCAGCAGAATCCCAATGATGATGACAAAAGTCTCTCTGTTATCCCCATTGTGGGAATTGGAGGCTTGGGAAAAACTACGCTTGCAAAGTTTGTGTTTAATGATAAGAGGATAGATAAGTGTTTCTCATTGAAGATATGGGTGTGTGTTTCTGATGACTTTGACATTAACAAACTCATTATTAAAATCATCAATTCTGCTAATGTTGCTGATGCTCCTCTTCCCCAACAAAATTTAAACTTGGTCGATCTGGAGCAATTACAAAATCGACTGAGAAACATACTTGCCGGTCAAAAATTCTTACTTGTCTTGGATGACGTATGGAATGATGACCGTGTTAAATGGGTTGAGTTGAGGAATTTAATACAAGAAGGGGTTGCTGCAGGAAGTAAAATTCTAGTGACTACACGTATTGATTCCATTGCTTCCATGATGGGAACTGTTACCTCTCACAAGTTACAAAGCCTTTCTCAGGATAATTCATTGTCTCTTTTTGTCAAATGGGCATTTAAAGAAGGCGAAGAGGAAAAACATCCTCATTTGGTAAATATCGGAAAAGAAATTCTGAACAAATGCAAAGGGGTTCCATTGGCTGTGAGAACATTGGGGAGTTTACTATTTTCAAAATTTGAGGCAAAGGAGTGGGAATATGTGAGAGACAATGAAATTTGGAATTTGCCACAAAAAAAAGATCACATTTTACCTTCACTTAAATTAAGTTATGATTTCTTGCCTTCCTATTTAAGGCAGTGTTTTGCATTATTTTCGCTTTACCCAAAGGATTATAAATTTCATAGTTTTGAGATAAGTAGGCTTTGGGGGGCACTTGGTGTCCTTGCATCACCTAGAAAGAATGAGACGCCGGAAGATGTTGTCAAACAGTATCTGGTTGAATTACTATCAAGATCTTTCCTTCAAGATTTTATCGATGGTGGCACTTTTTATCAATTTAAAATTCATGATTTGGTGCATGATCTTGCTGTATTTGTTACAAAAGAGGAGTGTCTACTTATAAATTCCCACATTCAAAATATTCCTGAGAATATTTGGCATCTGTCTTTTGCTGAATACAATTTTATTGGAAATTCATTCACCTCAAAATCGGTAGCTGTGAGAACCATAATGTTTCCAAATGGTGCAGAAGGAGCCAACGTTGAAGCTTTGCTAAATACTTGTGTGTCAAAGTTCAAATTATTGCGAGTTTTGGATTTAAGTGATTCGACATGCAAGACTTTGTCACGTTCCATTGGTAAGTTGAAACACTTGAGATATTTCAGCATTCAGAATAATCGCAACATCAAAAGACTCCCCAATTCTATTTGCAAGATCCAAAATTTGCAATTCTTGAATGTTCTGGGATGCAAGGAGCTGGAAGCATTGCCCAAAGGATTAAGAAAATTGATTAGTCTTCGGTCTTTGGATATAAGTACAAAGCAACCTGTTTTGCCTTACAGTGAGATTACCAACTTGATCTCACTTGCACAGCTGTCTATTGGATCAAGCCATAATATGGAGTCTATCTTTGGAGGGGTGAAGTTCCCTGCTCTTAAAACATTGTATGTTGGTGACTGTCATAGTCTGAAGTCTTTGCCACTGGATGTTACAAATTTTCCTGAATTAGAAACTCTGTTTGTTCAAGACTGCGTTAATCTGGACTTGGAACTGTGGAAGGACGACCATGAAGAACAAAACCTCAATGGCTTACCACAGCTGGTGAAGTTAAAATATGTTGTATTCAGGGGTTTACCACAGCTGGTGGCCTTACCTCAATGGCTTCAAGAAACTGCCAACTTCTTACAGACCTTGGGTATTAAAAACTGCGACAATCTTGAAATGCTTCCGGAGTGGCTGTCAACTATGACTAATCTGAAAGTACTTCTTATATTTGATTGTCCAAAGCTTATATCTCTCCCGGATAACATCCATCACCTCACCGCACTTGAACATTTGCATATCAGAGGTTGCCCTGAATTATGCAAAAAATGTCAGCCCCATGTCGGTGAGTTTTGGTCCAAAATATCACATATCAAACACGTCTTCATTGAAGAACCAGAAAAGCTGGAGGAAGAAGAAGATGAATAG 2634 0.3929 MAELFLFSIAESLITKLASHAFQEASRVVGLYDHLRDLKKTLSLVKAVLLDAEQKQEHNHELQEWLRQLKSVFYDAQNVLDEFECQTLRKQLLKAHGTIKDEVSHFFSSSNPLVFRSKMAQQIKDVSKRLDKVAADRHKFGLRIIDVDTRVVHSRDTSRMTHSRVSDSDVIGREHDKEKIIELLMQQNPNDDDKSLSVIPIVGIGGLGKTTLAKFVFNDKRIDKCFSLKIWVCVSDDFDINKLIIKIINSANVADAPLPQQNLNLVDLEQLQNRLRNILAGQKFLLVLDDVWNDDRVKWVELRNLIQEGVAAGSKILVTTRIDSIASMMGTVTSHKLQSLSQDNSLSLFVKWAFKEGEEEKHPHLVNIGKEILNKCKGVPLAVRTLGSLLFSKFEAKEWEYVRDNEIWNLPQKKDHILPSLKLSYDFLPSYLRQCFALFSLYPKDYKFHSFEISRLWGALGVLASPRKNETPEDVVKQYLVELLSRSFLQDFIDGGTFYQFKIHDLVHDLAVFVTKEECLLINSHIQNIPENIWHLSFAEYNFIGNSFTSKSVAVRTIMFPNGAEGANVEALLNTCVSKFKLLRVLDLSDSTCKTLSRSIGKLKHLRYFSIQNNRNIKRLPNSICKIQNLQFLNVLGCKELEALPKGLRKLISLRSLDISTKQPVLPYSEITNLISLAQLSIGSSHNMESIFGGVKFPALKTLYVGDCHSLKSLPLDVTNFPELETLFVQDCVNLDLELWKDDHEEQNLNGLPQLVKLKYVVFRGLPQLVALPQWLQETANFLQTLGIKNCDNLEMLPEWLSTMTNLKVLLIFDCPKLISLPDNIHHLTALEHLHIRGCPELCKKCQPHVGEFWSKISHIKHVFIEEPEKLEEEEDE* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1139 877 Gene3D - 10 124 - -
Gso19g1139 877 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 438 IPR027417 -
Gso19g1139 877 CDD RX-CC_like 8 134 IPR038005 -
Gso19g1139 877 Gene3D - 339 424 IPR042197 -
Gso19g1139 877 Gene3D Ribonuclease Inhibitor 547 872 IPR032675 -
Gso19g1139 877 SUPERFAMILY L domain-like 502 866 - -
Gso19g1139 877 Coils Coil 35 55 - -
Gso19g1139 877 Gene3D - 425 512 IPR036388 -
Gso19g1139 877 Gene3D - 153 334 IPR027417 -
Gso19g1139 877 PRINTS Disease resistance protein signature 198 213 - -
Gso19g1139 877 PRINTS Disease resistance protein signature 278 292 - -
Gso19g1139 877 PRINTS Disease resistance protein signature 376 390 - -
Gso19g1139 877 PRINTS Disease resistance protein signature 578 594 - -
Gso19g1139 877 PANTHER DISEASE RESISTANCE PROTEIN RP 6 796 IPR044974 GO:0006952
Gso19g1139 877 Pfam Rx N-terminal domain 11 101 IPR041118 -
Gso19g1139 877 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 796 - -
Gso19g1139 877 Pfam NB-ARC domain 173 426 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1139 Gso-Chr19 39612861 39616043 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1139 583 680 WRKY Transcription Factor Family AT4G12020 35.354 9.43e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1139 - - gmx:100781317 1643.25