Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1138 ATGGCTGAATTATTTCTCTTCAGCATCGCTGAGTCTCTCATAACAAAGCTTACTTCTCATGCTTTCCAAGAAGCTTCTTGGGTGGTGGGTTTGTACGACCATCTCCGAGACCTTAAAAAGACTCTCTCATTAGTCAAGGCAGTGCTGTTAGATGCTGAGCAAAAGCAGGAGCATAACCATGAGCTGCAGGAATGGCTGAGGCAGCTCAAAAGTGTCTTCTATGATGCCCAAGACGTGATCGATGAATTTGAGTGCCAAACACTGCAAAAGCAAGTTCTCAAAGCTCATGGTACCATCAAAGACGAGGTAAGCCACTTCTTCTCAAGTTCTAATCCACTTGTTTTTCGTTCCAAGATGGCTCAACAAATCAAAGATGTCAGCAAGAGGCTAGACAAGGTTGCAGCTGATAGGCATAAGTTTGGTCTCCGAATAATTGATGTTGACACACGAGTTGTGCATAGGAGAGACATGAGTCGCATGACACACTCCCGTGTGAGTGACTCAGATGTGATAGGAAGGGAACATGACAAAGAAAAGGTCATAAAGCTTTTGATGCAGCAGAATCCCAATGATGACGATAAAAGTCTCTCTGTTATCCCCATTGTGGGGATTGGAGGCTTGGGAAAAACTACACTTGCGAAGTTTGTGTTTAATGATAAGAGAATAAATGAGTGTTTCTCATTGAAGATGTGGGTGTGTGTTTCTGATGATTTTGACATTAACCAACTCATTATTAAAATCATCAATTCTACTAATGATGCTAATGCTCCTCTTTGCCAACAGAATTTAAACATGGTCGATCTGGAGCAATTACAAACTCATTTGAGAAACAAACTTGCCAATAAAAAATTCTTACTTGTCTTGGATGACATATGGAATGATGATCGTGTTAAATGGGTTGAGTTGAGGAATTTAATACAAGGAGGGGTTGCAGGAAGTAAAATTCTAGTGACTACACGTATTGATTCCATTGCTTCCATGATGGGAACTGTTACCTCTCACAAGTTAAAAAGACTTTCTCCGGAGGATTCATTGTCTCTTTTTGTCAAATGGGCATTTAAAGAAGGCGAAGACGAAAAACATCCTCATTTGGTAAATATTGGAAAAGAAATTGTGAACAAATGCAAAGGGGTTCCATTGGCTGTGAGAACATTGGGGAGTTTACTATTTTCAAAATTTGAGGAAAATGAGTGGGAATATGTGAGAGACAATGAAATTTGGAATTTACCACAAAAAAAAGATGACATTTTACCTGCACTTAAATTAAGTTATGATTTCTTGCCTTCCTATTTGAGGCAATGTTTTGCATTATTTTCACTTTACCCAAAGGATTATGAATTTCGTAGTGTTGAGGTAGCTAGGCTTTGGGAGGCACTTGGTGTCCTTGCACCACCAAGAAAGAATGAGACACCGGAAGATGTTGTCAAACAGTACCTGGATGAATTACTGTCAAGATCTTTCCTTCAAGATTTTATTGATGGTGGCACTATTTGTCAATTTAAAATTCATGATTTGGTGCATGATCTTGCGCTGTTTGTTGCAGAAGATGAGTGTCTACTCCTAAACTCCCACATTCAAAATATTCCTGAGAATATTCGGCATCTATCTTCTGCTGAATACAATTTTCTCAGAAATTCATTCACCTCAAAATCGGTAGCATTGAGAACCATAATGTTTCGAGATGGTGCAGAAGGAGCCAACGTTGAAGCTTTGTTAAATACTTGTGTGTTAAAGTCCAAATTTTTGCGAGTTTTGGATTTAAGGGATTCAACATGCAAGACTTTGCCATGTTCCATTGGTAAGTTGAAACACTTGAGATATTTCAGCATTCAGAATAATCGCAACATCAAGAGACTCCCCAATTCTATTTTCAAGCTCCAAAATTTGCAATTGTTCAATGTTTTGGGATGCGAGGAGCTGGAAGCATTGCCCAAAGGATTAAGAAAATTGATTAGTCTTCGGCATTTGGATATAAGTACAAAGCAACCTGTTTTGCCTTATAGTGAGATTACCAACTTGATCTCGCTTGCACATCTGTCTATTGGATCAAGCCATAATATGGAGTCTATCTTCGGAGGGGTGAAGTTCCCTGCTCTTAAAAGATTGAGTGTTTCTGACTGTCATAGTCTGAAGTCTTTGCCACTGGATGTTACGAATTTTCCTGAATTAGAAATTCTGATTGTTGAAGATTGTGTTAATCTGGACTTGGAACTGTGGAAGGACGACCTTGAAGAACAAAGCCCCATGTTGAAGTTAAAATGTGTTGGATTCGGGTGTTTACCACAGCTGGTGGCCTTACCACAATGGCTTCAAGAAACTGCCAACTTCTTACAGACCTTGGGTATTAAAAACTGCAACAATCTTGAAATGCTTCCGGAGTGGCTGTCAACTATGACTAATCTGAAAGTACTTATTATATCAGATTGTCCAAAGCTTATATCTCTCCCGGATAACATCCATCACCTCACCGCACTTGAACATTTGCATATCAGAGGTTGCCTTGAATTATGCAAAAAATGTCAGCCCCATGTCGGTGAGTTTTGGTCCAAAATATCACATATCAAAGACGTCTTCATTGAAGAGCCAGAAAAGCTGGAGGAAGAAGACGAATAA 2613 0.3934 MAELFLFSIAESLITKLTSHAFQEASWVVGLYDHLRDLKKTLSLVKAVLLDAEQKQEHNHELQEWLRQLKSVFYDAQDVIDEFECQTLQKQVLKAHGTIKDEVSHFFSSSNPLVFRSKMAQQIKDVSKRLDKVAADRHKFGLRIIDVDTRVVHRRDMSRMTHSRVSDSDVIGREHDKEKVIKLLMQQNPNDDDKSLSVIPIVGIGGLGKTTLAKFVFNDKRINECFSLKMWVCVSDDFDINQLIIKIINSTNDANAPLCQQNLNMVDLEQLQTHLRNKLANKKFLLVLDDIWNDDRVKWVELRNLIQGGVAGSKILVTTRIDSIASMMGTVTSHKLKRLSPEDSLSLFVKWAFKEGEDEKHPHLVNIGKEIVNKCKGVPLAVRTLGSLLFSKFEENEWEYVRDNEIWNLPQKKDDILPALKLSYDFLPSYLRQCFALFSLYPKDYEFRSVEVARLWEALGVLAPPRKNETPEDVVKQYLDELLSRSFLQDFIDGGTICQFKIHDLVHDLALFVAEDECLLLNSHIQNIPENIRHLSSAEYNFLRNSFTSKSVALRTIMFRDGAEGANVEALLNTCVLKSKFLRVLDLRDSTCKTLPCSIGKLKHLRYFSIQNNRNIKRLPNSIFKLQNLQLFNVLGCEELEALPKGLRKLISLRHLDISTKQPVLPYSEITNLISLAHLSIGSSHNMESIFGGVKFPALKRLSVSDCHSLKSLPLDVTNFPELEILIVEDCVNLDLELWKDDLEEQSPMLKLKCVGFGCLPQLVALPQWLQETANFLQTLGIKNCNNLEMLPEWLSTMTNLKVLIISDCPKLISLPDNIHHLTALEHLHIRGCLELCKKCQPHVGEFWSKISHIKDVFIEEPEKLEEEDE* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1138 870 Coils Coil 859 870 - -
Gso19g1138 870 Gene3D - 10 124 - -
Gso19g1138 870 CDD RX-CC_like 8 134 IPR038005 -
Gso19g1138 870 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 790 - -
Gso19g1138 870 PANTHER DISEASE RESISTANCE PROTEIN RP 6 790 IPR044974 GO:0006952
Gso19g1138 870 Gene3D - 153 333 IPR027417 -
Gso19g1138 870 PRINTS Disease resistance protein signature 198 213 - -
Gso19g1138 870 PRINTS Disease resistance protein signature 278 292 - -
Gso19g1138 870 PRINTS Disease resistance protein signature 375 389 - -
Gso19g1138 870 PRINTS Disease resistance protein signature 796 812 - -
Gso19g1138 870 SUPERFAMILY L domain-like 501 854 - -
Gso19g1138 870 Gene3D Ribonuclease Inhibitor 545 861 IPR032675 -
Gso19g1138 870 Coils Coil 35 55 - -
Gso19g1138 870 Gene3D - 338 422 IPR042197 -
Gso19g1138 870 Pfam NB-ARC domain 173 425 IPR002182 GO:0043531
Gso19g1138 870 Gene3D - 423 511 IPR036388 -
Gso19g1138 870 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 437 IPR027417 -
Gso19g1138 870 Pfam Rx N-terminal domain 11 101 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1138 Gso-Chr19 39598825 39602097 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1138 579 679 WRKY Transcription Factor Family AT4G12020 36.275 3.86e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1138 - - gmx:100781317 1508.43