Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1137 ATGGCTGAATTATTCATCTTCAGCATCGCTGAGTCTCTCATAACAAAGCTTGCTTCTCATGCTTTCCAAGAAGCTTCTCGGGTGGTGGGTTTGTACGACCATCTCCGAGACCTTAAAAAGACTCTCTCATTAGTCAAGGCAGTGCTGTTAGATGCTGAGCAAAAGCAGGAGCATAACCATGAGCTGCAGGAATGGCTGAGGCAGCTCAAAAGTGTCTTCTATGATGCCCAAGATGTGTTGGATGAATTTGAATGCCAAACACTGCAAAAGCAACTGCTCAAAGCTCATGGTACCATCAAAGACCAGGTAAGACACTTCTTCTCAAGTTCTAATCCACTTGTTTTTCGTTCCAAGATGGCTCAACAAATCAAAGATGTCAGCAAGAGGCTAGACAAGGTTGCAGCTGATAGGCATAAGTTTGGTCTCCGAATAATTGATGTTGACACACGAGTCGTTCATAGGAGAGACACGAGTCGCATGACACACTCCCGTGTGAGTGACTCAGATGTGATCGGAAGGGAACATGATAAAAAAAAGATCATAGAGCTTTTGATGCAGCAGAATCCCAATGATGATGACAAAAGTCTCTCTGTTATCCCCATTGTGGGAATTGGAGGCTTGGGAAAAACTACGCTTGCAAAGTTTGTGTTTAATGATAAGAGGATAGATAAGTGTTTCTCATTGAAGATATGGGTGTGTGTTTCTGATGACTTTGACATTAACCAACTCATTATTAAAATCATCAATTCTGCTAATGTTGCTGATGCTCCTCTTCCCCAACAGAATTTAAACATGGTCGATCTGGAGCAATTACAAAATCGACTGAGAAACATACTTGCCGGTCAAAAATTCTTACTTGTCTTGGATGACGTATGGAATGATGACCGTGTTAAATGGGTTGAGTTGAGGAATTTAATACAAGAAGGGGTTGCTGCAGGAAGTAAAATTCTAGTGACTACACGTATTGATTCCATTGCTTCCATGATGGGAACTGTTACCTCTCACAAGTTACAAAGCCTTTCTCCGGAGAATTCATTGTCTCTTTTTGTCAAATGGGCATTTAAAGAAGGCGAAGAGGAAAAACATCCTCATTTGGTAAATATCGGAAAAGAAATTCTGAACAAATGCAAAGGGGTTCCATTGGCTGTAAGAACATTGGGGAGTTTACTATTTTCAAAATTTGAGGCAAAGGAGTGGGAATATGTGAGAGACAATGAAATTTGGAATTTGCCACAAAAAAAAGATGACATTTTACCTGCACTTAAATTAAGTTATGATTTCTTGCCTTCCTATTTAAGGCAGTGTTTTGCATTATTTTCGCTTTACCCAAAGGATTATAAATTTCATAGTTTTGAGGTAAGTAGGCTTTGGGGGGCACTTGGTGTCCTTGCATCACCTAGAAAGAATGAGACGCCGGAAGATGTTGTCAAACAGTATCTGGTTGAATTACTATCAAGATCTTTCCTTCAAGATTTTATCGATGGTGGCACTTTTTATCAATTTAAAATTCATGATTTGGTGCATGATCTTGCTGTATTTGTTACAAAAGAGGAGTGTCTACTTATAAATTCCCACATTCAAAATATTCCTGAGAATATTTGGCATCTGTCTTTTGCTGAATACAATTTTATTGGAAATTCATTCACCTCAAAATCGGTAGCTGTGAGAACCATAATGTTTCCAAATGGTGCAGAAGGAGCCAACGTTGAAGCTTTGCTAAATACTTGTGTGTCAAAGTTCAAATTATTGCGAGTTTTGGATTTAAGTGATTCGACATGCAAGACTTTGTCAGGTTCCATTGGTAAGTTGAAACACTTGAGATATTTCAGCATTCAGAATAATCGCAACATCAAAAGACTCCCCAATTCTATTTGCAAGATCCAAAATTTGCAATTCTTGAATGTTCTGGGATGCAAGGAGCTGGAAGCATTGCCCAAAGGATTAAGAAAATTGACTAGTCTTCGGTCTTTGGATATAAGTACAAAGCAACCTGTTTTGCCTTACAGTGAGATTACCAACTTGATCTCGCTTGCACATCTGTCTATTGGATCAAGCCATAATATGGAGTCTATCTTTGGAGGGGTGAAGTTCCCTGCTCTTAAAACATTGTATGTTGCTGACTGTCATAGTCTGAAGTCCTTGCCACTGGATGTTACAAACTTTCCTGAATTAGAAACTCTGTTTGTTCAAGACTGCGTTAATCTGGACTTGGAACTGTGGAAGGACGGCCATGAAGAACAAAACCTCAATGGCTTACCACAGCTGGTGAAGTTAAAATATGTTGCATTTTGGGGCTTACCACAGCTGGTGGCCTTACCTCAATGGCTTCAAGAAACTGCCAACTCCTTACAGACCTTGATTATTAAAAACTGCAACAATCTTGAAATGCTTCCGGAGTGGCTGTCAACTATGACTAATCCGAAAGCACTTCATATATCAGATTGTCCAAAGCTTATATCTCTCCCGGATAACATCCATCACCTCGCCGCACTTGAACATTTGCATATCAGAGGTTGCCCTGAATTATGCAAAAAATGCCAGCCCCATGTCGGTGAGTTTTGGTCCAAAATATCACATATCAAAGACGTCTGCATTGAAGAACCAGAAAAGCTGGAGGAAGAAAACGAATAG 2631 0.3979 MAELFIFSIAESLITKLASHAFQEASRVVGLYDHLRDLKKTLSLVKAVLLDAEQKQEHNHELQEWLRQLKSVFYDAQDVLDEFECQTLQKQLLKAHGTIKDQVRHFFSSSNPLVFRSKMAQQIKDVSKRLDKVAADRHKFGLRIIDVDTRVVHRRDTSRMTHSRVSDSDVIGREHDKKKIIELLMQQNPNDDDKSLSVIPIVGIGGLGKTTLAKFVFNDKRIDKCFSLKIWVCVSDDFDINQLIIKIINSANVADAPLPQQNLNMVDLEQLQNRLRNILAGQKFLLVLDDVWNDDRVKWVELRNLIQEGVAAGSKILVTTRIDSIASMMGTVTSHKLQSLSPENSLSLFVKWAFKEGEEEKHPHLVNIGKEILNKCKGVPLAVRTLGSLLFSKFEAKEWEYVRDNEIWNLPQKKDDILPALKLSYDFLPSYLRQCFALFSLYPKDYKFHSFEVSRLWGALGVLASPRKNETPEDVVKQYLVELLSRSFLQDFIDGGTFYQFKIHDLVHDLAVFVTKEECLLINSHIQNIPENIWHLSFAEYNFIGNSFTSKSVAVRTIMFPNGAEGANVEALLNTCVSKFKLLRVLDLSDSTCKTLSGSIGKLKHLRYFSIQNNRNIKRLPNSICKIQNLQFLNVLGCKELEALPKGLRKLTSLRSLDISTKQPVLPYSEITNLISLAHLSIGSSHNMESIFGGVKFPALKTLYVADCHSLKSLPLDVTNFPELETLFVQDCVNLDLELWKDGHEEQNLNGLPQLVKLKYVAFWGLPQLVALPQWLQETANSLQTLIIKNCNNLEMLPEWLSTMTNPKALHISDCPKLISLPDNIHHLAALEHLHIRGCPELCKKCQPHVGEFWSKISHIKDVCIEEPEKLEEENE* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1137 876 Gene3D - 339 423 IPR042197 -
Gso19g1137 876 Gene3D Ribonuclease Inhibitor 547 869 IPR032675 -
Gso19g1137 876 PANTHER DISEASE RESISTANCE PROTEIN RP 6 796 IPR044974 GO:0006952
Gso19g1137 876 CDD RX-CC_like 8 134 IPR038005 -
Gso19g1137 876 Gene3D - 153 334 IPR027417 -
Gso19g1137 876 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 438 IPR027417 -
Gso19g1137 876 Pfam NB-ARC domain 174 426 IPR002182 GO:0043531
Gso19g1137 876 PRINTS Disease resistance protein signature 198 213 - -
Gso19g1137 876 PRINTS Disease resistance protein signature 278 292 - -
Gso19g1137 876 PRINTS Disease resistance protein signature 376 390 - -
Gso19g1137 876 PRINTS Disease resistance protein signature 649 665 - -
Gso19g1137 876 Coils Coil 35 55 - -
Gso19g1137 876 Gene3D - 424 512 IPR036388 -
Gso19g1137 876 Gene3D - 10 124 - -
Gso19g1137 876 SUPERFAMILY L domain-like 502 859 - -
Gso19g1137 876 Pfam Rx N-terminal domain 11 101 IPR041118 -
Gso19g1137 876 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1137 Gso-Chr19 39583458 39586480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1137 583 680 WRKY Transcription Factor Family AT4G12020 35.354 7.00e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1137 - - gmx:100781317 1669.44