Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1125 ATGGCTGAATCATTTATCTTCAGCATCGCTGAGTCTCTCATAACAAAGCTTGCTTCTCATGCTTTCCAAGAAGCTTCTCGGGTGGTGGGTTTGTACGACCATCTCCGAGACCTTAAAGAGACTCTCTCATTAGTCAAGGCAGTGCTGTTAGATGCTGAGCAAAAGCAGGAGCATAACCATGTGCTTCGGGAATGGCTGAGGCAGCTCAAAAGTGTCTTCTATGATGCCCAAGATGTGCTCGATGAATTTGAGTGCCAAACACTGCGAAAACAAGTGGTCAAAGCTCATGGTACTATCAAAGACGAGGTAAGCCACTTCTTCTCAAGTTCTAATCCACTTGTTTTTCGTTCCAAGATGGCTCAACAAATCAAACATGTCAGCAAGCGGCTAGACAAGGTTGCAGCTGATGGGCACAAGTTTGGTCTCCGAATAATTGATGTTGACACACGAGTTGTTCATAGGAGAGACACGAGTCGCATGACACACTCCAGTGGTGTGAGTGACTCAGATGTGATAGGAAGGGAACATGATAAAGAAAAGATCATAGAGCTTTTGATGCAGCAGAATCCCAATGATGACGAAAAGAGTCTCTCTGTTATCCCCATTGTGGGGATTGGAGGCTTGGGAAAAACTACACTTGCAAAGTTTGTGTTTAACGATAAGAGGATAGACGGGTGTTTCCCATTGAAGATGTGGGTGTGTGTTTCTGATGACTTTGACATTAACCAACTCATTATCAAAATCATCAATTCTGCGAATGTTGCTGATGCTCCTCTTCGCCAACAAAATTTAGACATGGTCGATCTGGAGCAATTACAAAATCAATTGAGAAGCAGACTTGCCGGTAAAAAATTCTTACTTGTCTTGGATGACGTATGGAATGATGACCGTGTTAGATGGGTTGATCTGAAGAATTTAATAAAGGTAGGGGTTGCTGCAGGAAGTAAAATTCTAGTGACTACACGTATTGATTCCATTGCTTCCATGATGGGGACTGTTGCCTCTTACAAGTTACAAAGCCTTTCTCCGAAGAATTCATTGTCTCTTTTTGTCAAATGGGCATTCAAAAACGAAGGCGAAGAGGAAAAACATCCTCATTTGGTAAATATCGGAAAAGAAATTGTGAACAAATGCAAAGGGGTTCCATTGGCTGTGAGAACATTGGGGAGTTTACTATTTTCAAAGTTTGAGGCAAATGAGTGGGAATATGTGAGAGACAATGAAATTTGGAATTTGCCACAAAATAAAGATGACATTTTACCTGCACTTAAATTAAGTTATGATTTCTTGCCTTCCTATTTGAGGCAATGTTTTGCATTGTTTTCACTTTACCCAAAGGATTATGAATTTGATAGTGTTGAGGTAGCTAGGCTTTGGGAGGCACTTGGTGTCCTTGCACCACCAAGAAAGAATGAGACACCGGAAGATGTTGCCAAACAGTATCTGGATGAATTACTGTCAAGATCTTTCCTTCAAGATTTTATTCATTATGGCACTATGTGTCAATTTAAAATTCATGATTTGGTGCATGATCTTGCTGTATTTGTTGCAAAAGATGAGTGTCTACTTATAAATTCCCACATTCAAAATATTCCTGAGAATATTCGGCATCTGTCTTTTGCTGAATACAATTTTCTTGGAAATTCATTCACCTCAAAATCGGTAGCTGTGAGAACCATAATGTTTCCAAATGGTGCAGAAGGAGGCAGCGTTGAATCTTTGCTAAATACCTGTGTGTCAAAGTTCAAATTATTGCGAGTTTTGGATTTAAGGGATTCGACATGCAACACTTTGCCACGTTCCATTGGTAAGTTGAAACACTTGAGATATTTCAGCATTGAGAATAATCGCAACATCAAGAGACTCCCCAATTCTATTTGCAAGCTCCAAAATTTGCAATTGTTGAATGTTTCGGGATGCGAGGAGCTGGAAGCATTGCCCAAAGGATTAAGAAAATTGATTAGTCTTCGGCTATTGGAGATAAGTACAAAGCAACCTGTTTTGCCTTACAGTGAGATTACCAACTTGATCTCGCTTGCACTTCTGACTATTGAATCATGCCATAATATGGAGTCTATCTTTGGAGGGGTGAAGTTCCCTGCTCTTAAAACATTGTATGTTGCTGACTGTCATAGTCTGAAGTCTTTGCCACTGGATGTTACAAATTTTCCTGAATTAGAAACTCTGGTTGTTCATGACTGTGTTAATCTGGACTTGGATCTGTGGAAGGACCACCATGAAGAACAAAGCCCCATGTTGAAGTTAAAATTTGTTGCATTCGTGGGTTTACCACAGCTGGTGGCCTTACCTCAATGGCTTCAAGAAACTGCCAACTCCTTACAGTCCTTGGTTATAGCAGATTGTCCAGAGCTTATATCTCTCCCGGATAACATCCATCACCTCACCGCACTTGAAAGGTTGAGAATTGCCGATTGTCCTGAACTATGTAGAAAATACCAGCCCCATGTCGGTGAGTTTTGGTCCAAAATATCACATATAAAAGAAGTCTTCATTGAAGAACCAGAAAAGCTGGAGGAAGAAGAAGACGAATAG 2553 0.4062 MAESFIFSIAESLITKLASHAFQEASRVVGLYDHLRDLKETLSLVKAVLLDAEQKQEHNHVLREWLRQLKSVFYDAQDVLDEFECQTLRKQVVKAHGTIKDEVSHFFSSSNPLVFRSKMAQQIKHVSKRLDKVAADGHKFGLRIIDVDTRVVHRRDTSRMTHSSGVSDSDVIGREHDKEKIIELLMQQNPNDDEKSLSVIPIVGIGGLGKTTLAKFVFNDKRIDGCFPLKMWVCVSDDFDINQLIIKIINSANVADAPLRQQNLDMVDLEQLQNQLRSRLAGKKFLLVLDDVWNDDRVRWVDLKNLIKVGVAAGSKILVTTRIDSIASMMGTVASYKLQSLSPKNSLSLFVKWAFKNEGEEEKHPHLVNIGKEIVNKCKGVPLAVRTLGSLLFSKFEANEWEYVRDNEIWNLPQNKDDILPALKLSYDFLPSYLRQCFALFSLYPKDYEFDSVEVARLWEALGVLAPPRKNETPEDVAKQYLDELLSRSFLQDFIHYGTMCQFKIHDLVHDLAVFVAKDECLLINSHIQNIPENIRHLSFAEYNFLGNSFTSKSVAVRTIMFPNGAEGGSVESLLNTCVSKFKLLRVLDLRDSTCNTLPRSIGKLKHLRYFSIENNRNIKRLPNSICKLQNLQLLNVSGCEELEALPKGLRKLISLRLLEISTKQPVLPYSEITNLISLALLTIESCHNMESIFGGVKFPALKTLYVADCHSLKSLPLDVTNFPELETLVVHDCVNLDLDLWKDHHEEQSPMLKLKFVAFVGLPQLVALPQWLQETANSLQSLVIADCPELISLPDNIHHLTALERLRIADCPELCRKYQPHVGEFWSKISHIKEVFIEEPEKLEEEEDE* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1125 850 Gene3D - 153 335 IPR027417 -
Gso19g1125 850 Gene3D - 426 514 IPR036388 -
Gso19g1125 850 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 440 IPR027417 -
Gso19g1125 850 CDD RX-CC_like 2 134 IPR038005 -
Gso19g1125 850 Gene3D - 10 124 - -
Gso19g1125 850 Gene3D - 340 425 IPR042197 -
Gso19g1125 850 Coils Coil 259 279 - -
Gso19g1125 850 Pfam NB-ARC domain 174 428 IPR002182 GO:0043531
Gso19g1125 850 Gene3D Ribonuclease Inhibitor 556 840 IPR032675 -
Gso19g1125 850 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 781 - -
Gso19g1125 850 PANTHER DISEASE RESISTANCE PROTEIN RP 6 781 IPR044974 GO:0006952
Gso19g1125 850 Coils Coil 35 55 - -
Gso19g1125 850 SUPERFAMILY L domain-like 504 822 - -
Gso19g1125 850 Pfam Rx N-terminal domain 11 101 IPR041118 -
Gso19g1125 850 PRINTS Disease resistance protein signature 199 214 - -
Gso19g1125 850 PRINTS Disease resistance protein signature 279 293 - -
Gso19g1125 850 PRINTS Disease resistance protein signature 378 392 - -
Gso19g1125 850 PRINTS Disease resistance protein signature 627 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1125 Gso-Chr19 39421651 39424824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1125 598 689 WRKY Transcription Factor Family AT4G12020 42.553 8.22e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1125 - - gmx:100786131 1463.74