Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1116 ATGAAGGTTGAAATTGAAGGCAGCCACAGTGATTATGCTGAATCTGTTTCCAGCCAACCAGAAAATAGAGGAAGATTGGAATCCAAGAAGAAACTGAAGAAAGTGAGGTCAATAAGGCTTGTAAGATTGCCAAGCAAGAGATCATCCACCAGAGGAGGGAGACCCCAATATGACCCTCTTTCCATTGATACAAAAAGTTTAGAGGGGCCAACACCAATTGAAATGGCAGATGCATCACCTAATTACATGAAGGCTACCAGCAGTTCTCATGCAAAGGATAGTTTTCAGAATACAGAAAGAATACTATTCACAAAGAAGACTTTGACAAGAATGTCTACTGCTTTGAAACTGAAGAGAAGTCTGACTAGAAAGATATCTGGAAGGACTGAACCAAAGAGGAAACTGAAGTCCTCAAGATCAGTCAGGTTTGCAGCTGTCAAGGGCCAAAAATCAACCAGAAAGTTTTATGAATCTAGTTATGGAAGTGATGACCAGAATTGGAGAAGTGCAAGTGATGCTGCTAACAAACCCCAGAGAGTCATGACCAGAAGATTAAGCTTGAAGCCTGTGAGGATCTTAACAAAGATGCCTACTTTCAAATCAAATAATTCTTCCATGGAGAGTGGCCATCAGATGTCTCAATCCCCAGACACAAGCTTGCATAGAGCCACTTGTTCTTCTGCTCTCAAGGATTCCCATTTTCCTGATCACATTGATCTCCCTCAAGAGGGAAGTGACTCTCAAGGAGTATCAGCTGTGAAGGTTTGTCCATATTCTTACTGCTCACTTCACGGTCACTGCCACGCCAATCTGCCTCCACTGAAGCGCTTTGTGTCAATGAGGAGGCGTGCGTTGAAGAGCCAAAAGCCAACAAAAATGGATCGTCAACCTGTTACTAGATCAAAGCAGATTGGTAATGCAAAGAAGGCCGCTCCGAAAACTCAAACTATCCATGGTGAAGATGGCAGATCTCATTTTGAGAACAAGAAAAAGATGGCAAGGGGCTTATGGATTAGGCCACATGGCACTCCAGCATCCACAGTTTCTGAAGGTGTGGAATCAACATCAACAGATGGAGTCGAGTTTTCTGCTCCTGATACTGAGATATTGGATGGAGAAGTAACCAACACTGGAATCACAAGCAAAAATATGGAGCCGGATTATGAAGTACTGACGATGAGTTCTGTACAGAAAGAGCCTACTGATATGGCATGTGGAATGAAGGAAAGAGATAAAAAATATGCCAAAATGTGGCAGTTGATGTATAAGCATGCTGTATTGAGTACCACAGGTGAAAATAAGCAGCAATTTGATGGGAAGGACAAGGAAGGAAGAGATCAAGATTCCCTTGCAACTAATGAAGTGAACAAATCTTGTAGCGATGGTTGCGATACAGACCAGGACATGGATGATGAAAATAAGGATGCAATTGAGCTGGTGCAGAAAGCATTTGATGAAATCCTTCTTCCAGAACTTGAAGACTTCTTTTCTGATGATCAATTCAAATCTGAAGGCATTGATTCAGATGAGGCACACTTACAAAAGAGTGAAGCTGAGAGAGAAAGGAATACCTCAACATCCACACAATCTCCAAGAGCACAGAGGATGGGGACCAAACCTGACCAAAGAGGTCCAAAAAGCTGGAGCAATCTGAAGAAGTTAATCCTCTTGAAAAGGTTTGTGAAAGCATTAGAGAAGGTAAGAAACATCAACCCCCAAAGACCAAGACATTTTCCTTCCGATGCTAACTTAGAAATGGAAAAAGTTTTTCTCAAGCACCAAACAGCAGAAGAGAAGAAGAATGCTGAGGAATGGATGCTTGACTATGCACTTCAAAAGGTTGTTTCTAAACTTGCACCTGCTCAAAGACAAAAGGTGGCACTTCTAGTAAAAGCTTTTGAAACAATTCTTCCATTTCAAGATGCTGAAAATAGTCCACGGTTTTCTGCAACGATGGAACCTCAAGCAAATCCAGTTCAACCCCTTGATGATTCCTCAAATCATAGAGAGGAAGAAACATCATTTTTTCATGATAGTAGTATGGAAATGGAAGATAATGATAGTGATGATCCAATTCCAGAACTGCACAATCCTACTATGCTCAAAGAAAGATGTCTTGACTATCCTGGAACTGAGACAGTCAAGAACAAGCCAGCATTTGGAGCTACTGAAGAAGACTTGACTGGAAAGCAAAGTTTAGCTGGCAGTTATGGTAATGGGGAGAAGATATCAAGTGACACTGATAATATTTATCTAGGGGAGATCAAAGATACCACATCAAGTTCCTTAAATGAGCCAGTTGAAATTATAAGAAGCAGTCACGAGGAGGCTCCAACCGATGAAATAGTCAATGATGTTCCAGAAGATTTGCTATCCAGTGTGAATACAGAAAATCCAGATATGAAATCTGAGTCACCTGGAAGAGACGTTGAAACCAAGAGTCTGAAGGGTGACAATGGGCGACAATTTTCCATGTCCAAAAGTTTAGTCCTAGAAGGTCTAGTTAGATCACTCAGATCTAATTTGATCGGTTCAGGAGCACCAGCAAATGAAGCAGCTGCTGAAAGAAAAGAAGAAATTGAAAATGTTAATATGGGAATTGAGACTCTTGAAGAGTTCCCTACAAAGGAACAATCTGAAGCTCCTACAAGTGCGGTTGTAGAACCTGAGACCCCTGTAGAGAAACAAAGCAACACAGGATTGTGGTACTTGGTGTATAAGCACATGGTATCAAATGTGGCGGAAAACAACTCTGAGTCACTAATTGATGGGGCAGACGAGAAAGAGTCAGGGTTGGATGACATCAGAACAGGAGTAACTTCTAATGCTTATGGAAATACACCTATGAAGGATCAAGAGATGCAATTCAAGGATCACGTTGTAGTTGATCCAGAAGTTGCACGCCAACAGATTGAAGCCATCAAGATGGTAGAAGAAGCAATTGATTCAATTCTTCCAGATGATCAGGATGACTTAGCAGACAAGGAATCACTCACAGACAGCACAATTTCTGACAACGCCAAACAATCCGACAGAACTGAGAGAATGCACAGTGAAGACCTGAACCAAAAAGAAGAAAAGATGGAATCCGGGAATGGAATGATCCAAAAACAAGAAGAAGAATCAGCACCAAAGGAGCAAAACAAAACAAACCAGAAAATGTCTAGAAGCTGGAGCAATCTTAAAAAAGTGATCCTGCTTAGGAGATTCATCAAGTCATTGGAAAAAGTAAGGAAATTCAACCCAAGAGGGACCAGATATCTACCTCTAGAACCTGATTCAGAAGCTGAAAAAGTTAACTTAAGGCATCAAGACATGGAAGAAAGAAAAGGCACCGAAGAATGGATGCTTGATTATGCACTTCGACAGGTTGTTTCCAAATTAACCCCTGCTAGGAAAAGAAAAGTGGAGCTGCTAGTGGAAGCTTTTGAAACAGTCATGCCAACCATAAAAAATTGA 3459 0.4123 MKVEIEGSHSDYAESVSSQPENRGRLESKKKLKKVRSIRLVRLPSKRSSTRGGRPQYDPLSIDTKSLEGPTPIEMADASPNYMKATSSSHAKDSFQNTERILFTKKTLTRMSTALKLKRSLTRKISGRTEPKRKLKSSRSVRFAAVKGQKSTRKFYESSYGSDDQNWRSASDAANKPQRVMTRRLSLKPVRILTKMPTFKSNNSSMESGHQMSQSPDTSLHRATCSSALKDSHFPDHIDLPQEGSDSQGVSAVKVCPYSYCSLHGHCHANLPPLKRFVSMRRRALKSQKPTKMDRQPVTRSKQIGNAKKAAPKTQTIHGEDGRSHFENKKKMARGLWIRPHGTPASTVSEGVESTSTDGVEFSAPDTEILDGEVTNTGITSKNMEPDYEVLTMSSVQKEPTDMACGMKERDKKYAKMWQLMYKHAVLSTTGENKQQFDGKDKEGRDQDSLATNEVNKSCSDGCDTDQDMDDENKDAIELVQKAFDEILLPELEDFFSDDQFKSEGIDSDEAHLQKSEAERERNTSTSTQSPRAQRMGTKPDQRGPKSWSNLKKLILLKRFVKALEKVRNINPQRPRHFPSDANLEMEKVFLKHQTAEEKKNAEEWMLDYALQKVVSKLAPAQRQKVALLVKAFETILPFQDAENSPRFSATMEPQANPVQPLDDSSNHREEETSFFHDSSMEMEDNDSDDPIPELHNPTMLKERCLDYPGTETVKNKPAFGATEEDLTGKQSLAGSYGNGEKISSDTDNIYLGEIKDTTSSSLNEPVEIIRSSHEEAPTDEIVNDVPEDLLSSVNTENPDMKSESPGRDVETKSLKGDNGRQFSMSKSLVLEGLVRSLRSNLIGSGAPANEAAAERKEEIENVNMGIETLEEFPTKEQSEAPTSAVVEPETPVEKQSNTGLWYLVYKHMVSNVAENNSESLIDGADEKESGLDDIRTGVTSNAYGNTPMKDQEMQFKDHVVVDPEVARQQIEAIKMVEEAIDSILPDDQDDLADKESLTDSTISDNAKQSDRTERMHSEDLNQKEEKMESGNGMIQKQEEESAPKEQNKTNQKMSRSWSNLKKVILLRRFIKSLEKVRKFNPRGTRYLPLEPDSEAEKVNLRHQDMEERKGTEEWMLDYALRQVVSKLTPARKRKVELLVEAFETVMPTIKN* 1153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1116 1152 PANTHER CALMODULIN BINDING PROTEIN PICBP 6 1150 - -
Gso19g1116 1152 MobiDBLite consensus disorder prediction 157 176 - -
Gso19g1116 1152 MobiDBLite consensus disorder prediction 431 470 - -
Gso19g1116 1152 MobiDBLite consensus disorder prediction 340 363 - -
Gso19g1116 1152 MobiDBLite consensus disorder prediction 647 663 - -
Gso19g1116 1152 MobiDBLite consensus disorder prediction 791 821 - -
Gso19g1116 1152 MobiDBLite consensus disorder prediction 347 362 - -
Gso19g1116 1152 Pfam Plant calmodulin-binding domain 1043 1148 IPR012417 GO:0005516
Gso19g1116 1152 Pfam Plant calmodulin-binding domain 535 638 IPR012417 GO:0005516
Gso19g1116 1152 MobiDBLite consensus disorder prediction 509 547 - -
Gso19g1116 1152 MobiDBLite consensus disorder prediction 199 223 - -
Gso19g1116 1152 MobiDBLite consensus disorder prediction 435 450 - -
Gso19g1116 1152 MobiDBLite consensus disorder prediction 986 1056 - -
Gso19g1116 1152 MobiDBLite consensus disorder prediction 1 78 - -
Gso19g1116 1152 MobiDBLite consensus disorder prediction 664 682 - -
Gso19g1116 1152 MobiDBLite consensus disorder prediction 921 948 - -
Gso19g1116 1152 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 6 1150 IPR044681 GO:0005516
Gso19g1116 1152 SMART CaM_binding_2 1034 1148 IPR012417 GO:0005516
Gso19g1116 1152 SMART CaM_binding_2 524 638 IPR012417 GO:0005516
Gso19g1116 1152 Coils Coil 1021 1041 - -
Gso19g1116 1152 MobiDBLite consensus disorder prediction 285 326 - -
Gso19g1116 1152 MobiDBLite consensus disorder prediction 647 688 - -
Gso19g1116 1152 MobiDBLite consensus disorder prediction 157 178 - -
Gso19g1116 1152 MobiDBLite consensus disorder prediction 802 816 - -
Gso19g1116 1152 MobiDBLite consensus disorder prediction 1007 1047 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1116 Gso-Chr19 39338758 39342884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1116 460 647 Calmodulin-binding Proteins AT5G04020 35.417 1.25e-23 106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1116 19 39338758 39342884 Gso3g1122 3 36537612 36542229 GST