Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1109 ATGGGGATGGCTGCAGAGTCACAGTTTCATGTCTTGGCTGTTGATGACAGTCTCATAGATAGGAAACTCATTGAGAGGCTCCTCAGAACCTCTTCTTATCAAGTTACTACAGTTGATTCTGGTAGCAAGGCTTTAGAGTTTCTGGGGTTGTGTGAGAATGATGAGAGCAACCCAAGTACACCATATGTTTGTCCCAACAACCATCAGGAATCTTCATCTTTGAGAAACATACCGGTGGTGATTATGTCATCTGAAAATGTGCCTTCAAGGATTAACAGATGTTTGGAGGAAGGAGCAGAAGAATTTTTCTTGAAGCCTGTGAGGCTGTCAGATTTAAACAAGCTTAAACCCCATATGAAGAAAACCAAGTTGAAAGATCAAAAACAAGGAACAGTAGAAAAGCTTGAAGACTTAGAAGTTCAACAGCAACAGCCACAACAACAAATCATCATCCAAAATGAGCAGCAACAAGCACCAAAATCCCGAGATCTTCTTCAGCCAGAGTCAGAGTCACATCCACATGCACAACCAACTATTGAACAACAGCAACAATCACTACAACAAGCCAACAACAATAGCAAGAGGAAGACCATGGAACAGGGCCTTTCACCTGAGACTGACAGAACAAGACCAAGATACAGTGGCATAGCCACTGTGGTATGA 663 0.4238 MGMAAESQFHVLAVDDSLIDRKLIERLLRTSSYQVTTVDSGSKALEFLGLCENDESNPSTPYVCPNNHQESSSLRNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLSDLNKLKPHMKKTKLKDQKQGTVEKLEDLEVQQQQPQQQIIIQNEQQQAPKSRDLLQPESESHPHAQPTIEQQQQSLQQANNNSKRKTMEQGLSPETDRTRPRYSGIATVV* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1109 220 Gene3D - 68 209 - -
Gso19g1109 220 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 56 IPR045279 GO:0009736
Gso19g1109 220 PANTHER TWO-COMPONENT RESPONSE REGULATOR 70 216 IPR045279 GO:0009736
Gso19g1109 220 ProSiteProfiles Response regulatory domain profile. 10 120 IPR001789 GO:0000160
Gso19g1109 220 SMART REC_2 9 116 IPR001789 GO:0000160
Gso19g1109 220 SUPERFAMILY CheY-like 8 115 IPR011006 -
Gso19g1109 220 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 3 56 - -
Gso19g1109 220 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 70 216 - -
Gso19g1109 220 MobiDBLite consensus disorder prediction 171 199 - -
Gso19g1109 220 Coils Coil 179 199 - -
Gso19g1109 220 Coils Coil 121 141 - -
Gso19g1109 220 MobiDBLite consensus disorder prediction 154 220 - -
Gso19g1109 220 Gene3D - 3 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1109 Gso-Chr19 39201104 39203312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1109 1 220 Response Regulator Gene Family AT3G57040 54.400 5.07e-72 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1109 K14492 - gmx:100814494 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1109 19 39201104 39203312 Gso3g1114 3 36380524 36382741 GST