Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1073 ATGACCATGCTGCCTCGGTCATTTACTATGATTGCAACAATAATAATCATTGTTCTTGCTCAAACACTTGTGGGGGTGATTTCACTTCCTGAAGCTGATAAAATAAGCAATTTGCCGGGCCAGCCACAGGTCGAATTTCAGCAATATTCTGGTTATGTCACCGTGGATGATCAACATCAGAGAGCTTTGTTTTACTACTTTGTTGAAGCTGAAGAAGACCCTGCTTCCAAGCCATTAGTCCTCTGGTTGAATGGAGGGCCCGGTTGTTCGTCGATTGGAGTTGGAGCTTTTGCTGAGCATGGTCCTTTCAGACCAAGTGACAACAATGTTCTTCAGCAAAATGATTATAGTTGGAACAAAGTGGCAAATGTGCTATACTTGGAGTCACCGGCTGGTGTTGGATTCTCTTACTCAAGCAATAAATCTTTCTATGCCTCAGTGACAGATGAAATTACAGCTAGGGATAATCTTGTTTTCCTACAGCGTTGGTTCACTAAATTCCCTGAGTACTCAAACAACGACTTCTTCATTACAGGGGAGAGCTATGGAGGTCACTATGTTCCACAGCTTTCACAACTTATTGTTCAAACCAAGACCAACTTCAATCTCAAGGGGATAGCAATAGGGAATCCTCTTCTTGAGTTTAATACTGATTTCAACTCCAGATCTGAGTACTTTTGGTCTCACGGACTGATATCAGATTCAACATACGAAGTCTTAACTAGAGTCTGCAACTTTTCCTCAATTAGGAGACAAATCCAAAATGGGAATCTTAGAGGCGTTTGTGTAAAAGCAAATAAGCTATTGAATACTGAGATTAGCAACTTTATAGATAAATATGATGTCACTCTCGATGTTTGTTTGTCATCAGTTAATCAACAGGCTTATGTGCTGAATCAACTGCAAGAGACACAGAAGATAGATGTTTGTATTGGTGATAAAACAACCACATACTTGAACAGAAAACAAGTCCAAAAAGCTCTGCATGCTAATCTTGTTGGAGTCACCAAATGGTCGACTTGCAGCTCAGTTCTGCATTATGACTATCAGAATCTAGAAATACCAACAATTCCTATTCTAGGGTCACTTGTTAAGTCTGGCATCAAGGTTCTAGTATACAGTGGAGATCAAGATTCAGTGATTCCATTAATAGGTTCGCGATCTCTAGTGAATGGATTAGCCAAGGAAATTGGACTTGATACAACAGTGGCCTATAGAGCCTGGTTTGAGGGAAAACAGGTGGCAGGATGGACAAAGGTATATGGGAACATCTTATCATATGCCACTATAAGAGGTGCATCTCATGAAGCTCCCTTTTCTCAACCACAGAGATCACTGCTGCTACTTAAAGCATTTCTGGAAGGAAAGCCACTACCTGGTGTTGCATAA 1389 0.4075 MTMLPRSFTMIATIIIIVLAQTLVGVISLPEADKISNLPGQPQVEFQQYSGYVTVDDQHQRALFYYFVEAEEDPASKPLVLWLNGGPGCSSIGVGAFAEHGPFRPSDNNVLQQNDYSWNKVANVLYLESPAGVGFSYSSNKSFYASVTDEITARDNLVFLQRWFTKFPEYSNNDFFITGESYGGHYVPQLSQLIVQTKTNFNLKGIAIGNPLLEFNTDFNSRSEYFWSHGLISDSTYEVLTRVCNFSSIRRQIQNGNLRGVCVKANKLLNTEISNFIDKYDVTLDVCLSSVNQQAYVLNQLQETQKIDVCIGDKTTTYLNRKQVQKALHANLVGVTKWSTCSSVLHYDYQNLEIPTIPILGSLVKSGIKVLVYSGDQDSVIPLIGSRSLVNGLAKEIGLDTTVAYRAWFEGKQVAGWTKVYGNILSYATIRGASHEAPFSQPQRSLLLLKAFLEGKPLPGVA* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1073 462 Gene3D - 310 346 - -
Gso19g1073 462 Gene3D alpha/beta hydrolase 30 289 IPR029058 -
Gso19g1073 462 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 460 IPR001563 GO:0004185|GO:0006508
Gso19g1073 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Gso19g1073 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Gso19g1073 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Gso19g1073 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 425 438 IPR001563 GO:0004185|GO:0006508
Gso19g1073 462 Gene3D - 356 455 - -
Gso19g1073 462 ProSitePatterns Serine carboxypeptidases, serine active site. 177 184 IPR018202 GO:0004185
Gso19g1073 462 ProSitePatterns Serine carboxypeptidases, histidine active site. 425 442 IPR033124 GO:0004185
Gso19g1073 462 Pfam Serine carboxypeptidase 39 455 IPR001563 GO:0004185|GO:0006508
Gso19g1073 462 PANTHER CARBOXYPEPTIDASE 12 460 - -
Gso19g1073 462 SUPERFAMILY alpha/beta-Hydrolases 36 459 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1073 Gso-Chr19 38639651 38642568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1073 318 458 Calmodulin-binding Proteins AT2G22960 31.915 1.13e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1073 K16297 - gmx:100799900 930.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1073 19 38639651 38642568 Gso3g1077 3 35835906 35839091 GST