Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1068 ATGGCGTCAAGAGCAATTGTTCAACAACAACAAGCCAGAGGTGAAGCAGTAGTAGGGGGAGGAAAACAGCAGAAGAAGAACGGTGTTGCGGATGGAAGGAACCGCAAGGCATTGGGTGACATTGGGAATTTGGCCAATATAAGAAGTGCCGTTGAAGTCAAGCCAAATCGCCCTATCACAAGGAGTTTTGGTGCGCAATTACTTGCCAATGCACAAGCGGCAGCAGCTGCTGGGAATAACAAGAAACAAGCTTGTGCTAATGTGGCTGGTCCTCCTGCTGTTGCCAATGGAGGAGTTGCGGTGGCCAAAAGAGTGGCCCCCAAACCGGGTCCGAAGAAAGTGACCGTGACTGTAAAACCTAAGCCTGAAGAAGTCATTGACATTGAAGCTAGTCCAGATAAGAAGGAGGTCCTGAAAGACAAGAAGAATGAAGGAGATGCCAACTCCAAGAAGAAATCACAACACACTCTTACTTCAGTGCTCACTGCAAGAAGCAAGGCGGCATGTGGCATAACTAACAAACCAAAGGAGCAGATCATTGACATTGATGCTTCTGATGTTGACAATGAACTTGCTGCTGTGGAGTACATTGATGACATTTACAAGTTCTACAAACTTGTTGAGAACGAGAGCCACCCCCACGACTACATTGATTCACAACCTGAAATAAATGAGAGGATGAGAGCTATTCTGGTTGATTGGCTGATAGACGTTCACACCAAGTTTGAACTTTCTCTAGAGACCCTTTACCTGACCATCAACATAATTGATCGGTTTTTAGCAGTTAAGACAGTTCCAAGGAGGGAACTGCAATTGGTTGGCATCAGTGCCATGCTGATGGCATCCAAATATGAAGAAATCTGGCCCCCTGAGGTTAATGACTTTGTGTGCCTCTCAGATAGGGCTTACACTCATGAACAGATACTGGCCATGGAGAAAACCATATTAAATAAGCTGGAATGGACTTTGACTGTGCCTACACCTTTTGTTTTCCTAGTTCGTTTTATCAAGGCAGCGGTCCCAGATCAGGAGTTGGAAAACATGGCTCATTTTATGTCTGAGTTGGGAATGATGAACTATGCAACCTTAATGTACTGCCCATCAATGGTTGCTGCCTCAGCAGTGTTTGCAGCAAGATGCACTCTGAACAAGGCTCCCCTTTGGAATGAGACACTTAAGCTGCACACTGGTTACTCACAAGAGCAACTCATGGATTGTGCTAGACTATTGGTGGGGTTCCATTCCACTCTTGGGAATGGAAAACTTAGGGTTGTGTACAGAAAGTACTCTGACCCTCAGAAGGGTGCAGTTGCTGTGCTCCCACCAGCTAAACTTCTGCCTGAAGGCTCTGCTTCCCAACATAGTTGA 1368 0.4598 MASRAIVQQQQARGEAVVGGGKQQKKNGVADGRNRKALGDIGNLANIRSAVEVKPNRPITRSFGAQLLANAQAAAAAGNNKKQACANVAGPPAVANGGVAVAKRVAPKPGPKKVTVTVKPKPEEVIDIEASPDKKEVLKDKKNEGDANSKKKSQHTLTSVLTARSKAACGITNKPKEQIIDIDASDVDNELAAVEYIDDIYKFYKLVENESHPHDYIDSQPEINERMRAILVDWLIDVHTKFELSLETLYLTINIIDRFLAVKTVPRRELQLVGISAMLMASKYEEIWPPEVNDFVCLSDRAYTHEQILAMEKTILNKLEWTLTVPTPFVFLVRFIKAAVPDQELENMAHFMSELGMMNYATLMYCPSMVAASAVFAARCTLNKAPLWNETLKLHTGYSQEQLMDCARLLVGFHSTLGNGKLRVVYRKYSDPQKGAVAVLPPAKLLPEGSASQHS* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1068 455 MobiDBLite consensus disorder prediction 130 157 - -
Gso19g1068 455 CDD CYCLIN 227 316 IPR013763 -
Gso19g1068 455 SMART Cyclin_C_2 326 443 IPR004367 -
Gso19g1068 455 Pfam Cyclin, C-terminal domain 326 442 IPR004367 -
Gso19g1068 455 Gene3D - 199 438 - -
Gso19g1068 455 CDD CYCLIN 324 411 IPR013763 -
Gso19g1068 455 PANTHER CYCLINS 22 449 IPR039361 -
Gso19g1068 455 Gene3D - 213 324 - -
Gso19g1068 455 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 22 449 - -
Gso19g1068 455 MobiDBLite consensus disorder prediction 1 36 - -
Gso19g1068 455 PIRSF Cyclin_A_B_D_E 1 455 IPR039361 -
Gso19g1068 455 SUPERFAMILY Cyclin-like 188 323 IPR036915 -
Gso19g1068 455 Pfam Cyclin, N-terminal domain 199 323 IPR006671 -
Gso19g1068 455 MobiDBLite consensus disorder prediction 130 151 - -
Gso19g1068 455 SMART cyclin_7 330 412 IPR013763 -
Gso19g1068 455 SMART cyclin_7 233 317 IPR013763 -
Gso19g1068 455 ProSitePatterns Cyclins signature. 228 259 IPR006671 -
Gso19g1068 455 SUPERFAMILY Cyclin-like 325 445 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1068 Gso-Chr19 38486988 38489970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1068 1 452 Core Cell Cycle Gene Families AT4G37490 51.288 5.40e-147 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1068 K21777 - gmx:547919 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1068 19 38486988 38489970 Gso3g1065 3 35566625 35569797 GST