Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1065 ATGCTTCAAATAACTAACGAAACCCCAAAAATTCCCAAAACCATATCTCAGAAACCCTCACCAATGACTGAGTCAATGCCTGCCGTGGAGCCGTCACCGGAGCCCTCGCCGGAGCCGTCACCGGAGCCTCCAGCGTCTGATCTCGTGTTTGACGACTTCTCCTCCAACTTCAACGCCTTCCTCATCCCCTCCATGGACTCGCTCTTCAACACCACTGACGCGCTCCCCTTCGCCTCCGATCTCGAATTCGGCATGGATTTCGACAACAACGGGGAATTCGAAATCACCTTCGACGACCTCGACGAACTCGACGACATCTTCATCCCCTCCGACGCCGAGGATTTCCTCCTCCCCGACGTCTGTAACTCTAAGTACGACTCCGCTTCGCCGCCGATCGACGCAAAGAATTCCGATTCGCCGGATTCCGACGTGTCCGCGGTTTCCGGCGAGGGCGATTCCGCGGATAATGTTAGGGTTTCGAGCGTTCCGTCGCCGGAGGCTGAGTTTTGCGACCGGGAGGAGTCTTCTAACGGACCGGTTTCGTCGCAGGGTTCCGGCAACGGCGGATCGGGTGTATACGAGGCCATGCACTCGCCCTCACCTGATTCCGGCCCTTACGAGAGGGACATAACATCGTCTCATGCGCATGCAGTTACAAACAATGATGTGAAAATGGAGGAAGCTCCAGCTTTTGATCTGAAGAGAAAGAAAGAAAGTTGCGATGGAAGTGCTACCAAGCACAGAAGGTTCTCTTCCTTGGTGGAGAATAATAATAATAACACCGAGAAACAGTCTCAGTCTGGTTTGAATGGAATTGACGATGAGGATGAGAAAAGGAAGGCGAGGTTGATGAGGAACAGGGAAAGTGCACAGCTTTCTAGGCAGAGGAAGAAGCATTACGTGGAGGAGCTTGAGGAGAAAGTGAGATCATTGAATTCCATCATTGCTGATATGAGTAGTAAGATGTCGTATGTGGTGGCTGAGAATGCTACACTTAGACAGCAAGTGGGTGCTGCTGGTGTCATGTGTCCTCCTCCTCCAGCACCTGCTCCTGGGATGTACCCTCATCATCCTCCAATGGCACCTATGCCTTATCCGTGGATGCCTTGTGCTCCTTATGTTGTTAAGCCTCAAGGGTCTCAGGTTCCTTTGGTTCCCATTCCTAGGTTGAAGCCTCAGCAACCTGCTTCAGCCCCCAAGGGTAAAAAGAGTGAGAACAAGAAGAGTGAGGGGAAAACTACGAAGGTTGCTAGCATTAGTTTGCTGGGTTTGTTTTTCTTTATCATGCTTTTCGGTGGGCCTCTTGTTGATTTTAGGTTTGGGGGTTTAGTGGAGAATGTTCCTGGTACTGGTAGGTCTAATTATGTTAGTGATAGGGTGTATGGTCAAGGTGGAGGGAAGGTTTGGTCTTTGAATGGTCGTAGGAATGGGTCTGAAAGAGATGAGGATGTAGGGTTTTCTAATGGTGGGAGGTTTAGTGTTTCTGACAGAGTGAATTATGAGCGAGGCCGGAATTTTAGAGAAGAAAGGCATGATCGTCGGAAAGGCTCGGATGATTTCGGTCGTCAGGGCAATGCCAGTGAGCCTCTTGTTGCTTCTCTGTATGTACCTAGGAATGATAAGATGGTGAAGATTGACGGGAACTTGATTATCCATTCCATTATGGCCAGTGAGAAAGCCATGGCATCTCAAACTGCTGAGGCAAAGAAGGACAAGAGAGAAACTGGGTTGGCCATTCCTAAGGATTTGGATTCTGCACTGGCTATTCCTGGAGTTGGAAGAAGCAGAGGTCAACATCCACATGTGTATAGTGTTTCTCCTGAACAGAGGAAGGCTCTTGGCTCTGGTTCAACCAAAGTTTTGAAGGACCATATGAAGTCCTCTGTAACTGATGGTAAAATGCAACAGTGGTTCCGTGAAGGTCTCGTAGGGCCAATGTTAAGTTCTGGCATGTGCACTGAAGTTTTCCAGTTTGATGTTTCTCCAAGTCCTGGAGCAATAGTTCCTGCAACATCAGTAGCCAATGTTTCCACTGAAAACCGTCAGAATGCTACCAGTGTCAAAAAGACCAGGAATAGAAGAACCCTTCATGAGCTCCCAGAGCCGCTTAATGGATCTAGTCTGAACATAACTGAAGAACGAGTAAAGAATTTGCAGAAAGACCACCTCCATGGTAATAAGTCTTCTATGGTAGTTTCAGTCCTTGTTGATCCCAAAGAGGCTGGCGATGGTGATGTTGATGTTGACGGCATGATGAGACCAAAGTCACTCTCTCGGATTTTTGTGGTTGTGCTAATTGATAGTGTCAAGTATGTCACTTACTCTTGTGGTCTGCCTCGTGCTTCTCCCCATTTGGTGACTGGTTACGTATGA 2373 0.4867 MLQITNETPKIPKTISQKPSPMTESMPAVEPSPEPSPEPSPEPPASDLVFDDFSSNFNAFLIPSMDSLFNTTDALPFASDLEFGMDFDNNGEFEITFDDLDELDDIFIPSDAEDFLLPDVCNSKYDSASPPIDAKNSDSPDSDVSAVSGEGDSADNVRVSSVPSPEAEFCDREESSNGPVSSQGSGNGGSGVYEAMHSPSPDSGPYERDITSSHAHAVTNNDVKMEEAPAFDLKRKKESCDGSATKHRRFSSLVENNNNNTEKQSQSGLNGIDDEDEKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSLNSIIADMSSKMSYVVAENATLRQQVGAAGVMCPPPPAPAPGMYPHHPPMAPMPYPWMPCAPYVVKPQGSQVPLVPIPRLKPQQPASAPKGKKSENKKSEGKTTKVASISLLGLFFFIMLFGGPLVDFRFGGLVENVPGTGRSNYVSDRVYGQGGGKVWSLNGRRNGSERDEDVGFSNGGRFSVSDRVNYERGRNFREERHDRRKGSDDFGRQGNASEPLVASLYVPRNDKMVKIDGNLIIHSIMASEKAMASQTAEAKKDKRETGLAIPKDLDSALAIPGVGRSRGQHPHVYSVSPEQRKALGSGSTKVLKDHMKSSVTDGKMQQWFREGLVGPMLSSGMCTEVFQFDVSPSPGAIVPATSVANVSTENRQNATSVKKTRNRRTLHELPEPLNGSSLNITEERVKNLQKDHLHGNKSSMVVSVLVDPKEAGDGDVDVDGMMRPKSLSRIFVVVLIDSVKYVTYSCGLPRASPHLVTGYV* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1065 790 CDD bZIP_HY5-like 279 330 - -
Gso19g1065 790 MobiDBLite consensus disorder prediction 127 275 - -
Gso19g1065 790 Pfam bZIP transcription factor 277 336 IPR004827 GO:0003700|GO:0006355
Gso19g1065 790 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 37 787 - -
Gso19g1065 790 MobiDBLite consensus disorder prediction 26 44 - -
Gso19g1065 790 MobiDBLite consensus disorder prediction 129 146 - -
Gso19g1065 790 MobiDBLite consensus disorder prediction 503 525 - -
Gso19g1065 790 MobiDBLite consensus disorder prediction 1 23 - -
Gso19g1065 790 SUPERFAMILY Leucine zipper domain 278 336 IPR046347 GO:0003700|GO:0006355
Gso19g1065 790 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 37 787 - -
Gso19g1065 790 MobiDBLite consensus disorder prediction 175 189 - -
Gso19g1065 790 Gene3D - 276 343 - -
Gso19g1065 790 Coils Coil 301 321 - -
Gso19g1065 790 MobiDBLite consensus disorder prediction 503 521 - -
Gso19g1065 790 SMART brlzneu 274 338 IPR004827 GO:0003700|GO:0006355
Gso19g1065 790 MobiDBLite consensus disorder prediction 384 413 - -
Gso19g1065 790 MobiDBLite consensus disorder prediction 227 245 - -
Gso19g1065 790 MobiDBLite consensus disorder prediction 1 49 - -
Gso19g1065 790 MobiDBLite consensus disorder prediction 249 268 - -
Gso19g1065 790 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 276 339 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1065 Gso-Chr19 38453330 38456707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1065 55 787 bZIP Transcription Factor Family AT2G40950 47.175 1.91e-165 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso19g1065 bZIP_1 1.6e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1065 K25783 - gmx:100127362 1392.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1065 19 38453330 38456707 Gso3g1061 3 35519439 35522861 GST