Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1034 ATGGGATCTCAAGGTGGGACAACCCAAGACCAAGAGCCAAAGACTGGTTCTTTGACCAGGCAAGGGTCTTTGTACAATCTCACCCTTGATGAGGTGCAAAACCAGCTTGGAAATTTAGGGAAACCCTTAGGAAGCATGAATCTTGATGAGCTGCTCAAGAGTGTGTGGACTGCTGAATCTGGAACTGATGCTTACATGCAGCATGGTGGTCAGGTGGCTTCTGCTGGCTCATCTTTGAACCCACAAGGGAGCCTAACATTGAGTGGGAATCTTAGCAAGAAAACTATTGATGAGGTTTGGAGAGATATGCAACAAAAGAAGAGTGTTGGTAAGGAAAGACAGCCTACACTTGGTGAGATGACCCTGGAGGATTTCTTGGTGAAGGCTGGTGTGGCTACTGAACCTTTTCCCAATGAGGATGGTGCCATGGCCATGTCAGGGGTTGATTCCCAACACAACACATCACAACATGCCCATTGGATGCAATACCAGCTCACTTCAGTTCAGCAGCAGCCACAGCAACAACAGCATCAGCATCAAAATCAGCAGAATAGTGTGATGCTGGGTTTTTCGGGTTTTATGACTGGCCATGCGGTTCAACAGCCTATACCGATTGTGGTGAATACGGTTCTGGATGCAGGATACTCAGAAGCATTGCCATCTTCTTTGATGGGTGCCTTGTCTGATTCACAAACTGCAGGTAGGAAAAGGGATGCCTCAGGTAACGTTGTTGAGAAAACTGTAGAGAGGAGGCAGAAGAGGATGATAAAAAATAGGGAATCTGCAGCTCGGTCCCGGGCTAGAAAACAGGCTTACACACAAGAGCTGGAGATTAAAGTTTCCCAATTAGAAGAAGAGAATGAAAGGCTTAGAAGACAGAATGAGATAGAGAGGGCATTGCCAAGTGCGCCACCACCTGACCCTAAGCATCAGCTTCGCAGAACTAGTTCAGCTCCCCTTTGA 963 0.4725 MGSQGGTTQDQEPKTGSLTRQGSLYNLTLDEVQNQLGNLGKPLGSMNLDELLKSVWTAESGTDAYMQHGGQVASAGSSLNPQGSLTLSGNLSKKTIDEVWRDMQQKKSVGKERQPTLGEMTLEDFLVKAGVATEPFPNEDGAMAMSGVDSQHNTSQHAHWMQYQLTSVQQQPQQQQHQHQNQQNSVMLGFSGFMTGHAVQQPIPIVVNTVLDAGYSEALPSSLMGALSDSQTAGRKRDASGNVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSQLEEENERLRRQNEIERALPSAPPPDPKHQLRRTSSAPL* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1034 320 SUPERFAMILY Leucine zipper domain 250 296 IPR046347 GO:0003700|GO:0006355
Gso19g1034 320 MobiDBLite consensus disorder prediction 285 320 - -
Gso19g1034 320 MobiDBLite consensus disorder prediction 229 269 - -
Gso19g1034 320 PANTHER BZIP TRANSCRIPTION FACTOR 2 318 - -
Gso19g1034 320 CDD bZIP_plant_BZIP46 250 295 - -
Gso19g1034 320 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 318 IPR043452 GO:0003700|GO:0045893
Gso19g1034 320 Pfam bZIP transcription factor 250 295 IPR004827 GO:0003700|GO:0006355
Gso19g1034 320 SMART brlzneu 246 314 IPR004827 GO:0003700|GO:0006355
Gso19g1034 320 Gene3D - 248 300 - -
Gso19g1034 320 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 248 293 IPR004827 GO:0003700|GO:0006355
Gso19g1034 320 Coils Coil 266 300 - -
Gso19g1034 320 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 253 268 IPR004827 GO:0003700|GO:0006355
Gso19g1034 320 MobiDBLite consensus disorder prediction 239 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1034 Gso-Chr19 38001614 38006498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1034 1 320 bZIP Transcription Factor Family AT3G56850 56.024 8.85e-105 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso19g1034 bZIP_1 4.3e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1034 K14432 - gmx:100783666 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0702 5 11433901 11438853 Gso19g1034 19 38001614 38006498 GST