Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1033 ATGTATCACACAAAGAAATTTTCACCGGCTAGCATGGTGCCGCATAAATCTCAAGGTGGTGCTGAACAGCTTGCAAATGCTGGGGTTTTGGGTGGATCGGCTGTAAAAACTGCTGCACCTTCTGGGGGAAGTGGGAAGCAACGTTTAAGGTGGACATCTGATCTTCATGACCGTTTTGTGGATGCCATTACACAACTTGGTGGACCAGATAGAGCAACACCAAAAGGTGTTCTTAGAGTGATGGGTGTTCCTGGACTGACCATTTATCATGTTAAAAGTCATTTACAGAAATATCGCCTTGCAAAATACTTGCCTGAATCACCAGCTGATGGTAAAGACCCTAAAGATGAGAAGAGGATGTCTGGGGACAGCATTTCTGGTGCAGATTCTTCCTCGGGAATGCCAATCAATGATGCCCTAAGAATGCAGATGGAGGTTCAAAAACGTCTGCATGAGCAGCTTGAGGTTCAAAAGCAATTACAAATGAGAATTGAAGCACAGGGTAAATACTTGCAAAAGATCATAGAGGAACAGCAGAAATTAGGTAGTACCTTGACAACCTCGGAAACCCTCCCTTTGTCCCATGATAAGCAAAATCATCCTCAGTCAGAGGCTTCTGGATCTAGTGATGCCCTTGCAAGCACTGTGTCTCCACTTAAAAAACAGAGAATCGATGATGGTTCCAAGGAAGGCTTCACTGCTTCCCAAGTAAGAAAGAATGACAATGTTGGTCAGTTGGATCCAAACTTATATGATGATGCTGGGTTTGGATTTGATTTGGAGACAAAAAAGGATGAAGATAATGAGAGTGGACAGTAA 819 0.4347 MYHTKKFSPASMVPHKSQGGAEQLANAGVLGGSAVKTAAPSGGSGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADGKDPKDEKRMSGDSISGADSSSGMPINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGSTLTTSETLPLSHDKQNHPQSEASGSSDALASTVSPLKKQRIDDGSKEGFTASQVRKNDNVGQLDPNLYDDAGFGFDLETKKDEDNESGQ* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1033 272 MobiDBLite consensus disorder prediction 106 123 - -
Gso19g1033 272 SUPERFAMILY Homeodomain-like 45 100 IPR009057 -
Gso19g1033 272 Gene3D - 45 104 - -
Gso19g1033 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Gso19g1033 272 PANTHER OS05G0491500 PROTEIN 3 263 - -
Gso19g1033 272 MobiDBLite consensus disorder prediction 191 272 - -
Gso19g1033 272 Pfam Myb-like DNA-binding domain 49 99 IPR001005 -
Gso19g1033 272 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
Gso19g1033 272 MobiDBLite consensus disorder prediction 105 135 - -
Gso19g1033 272 MobiDBLite consensus disorder prediction 257 272 - -
Gso19g1033 272 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 263 IPR044848 GO:0003700
Gso19g1033 272 MobiDBLite consensus disorder prediction 191 216 - -
Gso19g1033 272 Pfam MYB-CC type transfactor, LHEQLE motif 134 180 IPR025756 -
Gso19g1033 272 Coils Coil 137 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1033 Gso-Chr19 37995340 37999424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1033 36 181 G2-like Transcription Factor Family AT3G04450 53.425 1.80e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso19g1033 Myb_DNA-binding 2.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1033 - - gmx:100783132 524.242