Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1031 ATGGCCGAGCCACAAGGTGATATTGGTGGTGACAGTGGTGCTTCTGGAAGCAAGCGTAGAAGCACTGTTTCCAAGCGTGGCATGGTAGCACAAACACAAGATGAAGCAATAGTGGGATCTTCACCCGCAACACCATGTGGGGCTTGCAAGTTCTTGAGGAGGAAGTGCATTGGGGGATGCATTTTTGCACCCTACTTTTGTACTGATCAGGGTGCAGCTAAGTTTGCAGCTGTGCACAAGGTGTTTGGGGCTAGCAATGTGTCAAAGCTCTTGTCCAACATTCCGGCGAACCGCCGCCACGAAGCGGCAACATCCATATCGTATGAGGCTCAGGCAAGGCTGTCTGATCCAGTTTATGGTTGTGTCTCCACCATCCTTGCCCTGCAACAACAGGTGGTATCTTTGCAAGCAGAGCTAGCTATGTTGCAAACTCAACTCATGAATAGCAAGTTTTTCTATACAAGTGCTCTTCAAACCACACAACTACATCAACCAAACATGAATGCAGCAGCACTACATCCAGCATATTCCAACAATTCATGTGGTTCCACCAACCTTTTAAACTTGAGCAACTTCAATAATACGCCTAGCTTTGACCTTGCAATGGACACAACACCCTCATCGCATAGTTTGGAGCCTCTTCAACTCACAAGGTTGTCCCAATATGAGGAAGAGGAGGAAGAAGAAAGCAAAACCCAACAAACTTTCGACCACCATTAA 720 0.4708 MAEPQGDIGGDSGASGSKRRSTVSKRGMVAQTQDEAIVGSSPATPCGACKFLRRKCIGGCIFAPYFCTDQGAAKFAAVHKVFGASNVSKLLSNIPANRRHEAATSISYEAQARLSDPVYGCVSTILALQQQVVSLQAELAMLQTQLMNSKFFYTSALQTTQLHQPNMNAAALHPAYSNNSCGSTNLLNLSNFNNTPSFDLAMDTTPSSHSLEPLQLTRLSQYEEEEEEESKTQQTFDHH* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1031 239 Pfam Lateral organ boundaries (LOB) domain 45 143 IPR004883 -
Gso19g1031 239 ProSiteProfiles LOB domain profile. 44 146 IPR004883 -
Gso19g1031 239 MobiDBLite consensus disorder prediction 1 26 - -
Gso19g1031 239 PANTHER LOB DOMAIN CONTAINING PROTEIN 14 232 - -
Gso19g1031 239 Coils Coil 125 145 - -
Gso19g1031 239 PANTHER LOB DOMAIN-CONTAINING PROTEIN 20 14 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1031 Gso-Chr19 37976835 37980246 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1031 44 230 AS2 family AT3G03760 58.081 5.19e-69 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso19g1031 LOB 1.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1031 - - gmx:100804332 455.292