LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso19g1003	ATGGATTTCTTGCAAGCACCAGAAAATCAGATACTTGTGGGTGTGGCCGTGGCCGTTGTAGCCATTGGGCTTGGTGCTGTCTATCTCTATTCATCTAAGAAGCGCAAAGGTTGCTTGGACCCATTGAACTTTAAGGTGTTCAAACTTGTTAAGCGTGCACAGCTGAGCCATAATGTTGCTAAGTTCACATTTGCACTTCCAACACCTACATCTGTTTTGGGTCTTCCAATTGGGCAACACATAAGTTGCAGGGGTAAAGATGCTCAAGGTGAAGACGTTATCAAACCATATACCCCTACTACATTGGATTCCGATGTTGGACATTTTGAACTAGTTATTAAGATGTACCCACAAGGAAGGATGTCACACCATTTCCGTGAGATGCGTGTTGGTGACTACCTTTCTGTGAAAGGACCCAAGGGACGTTTCAAGTACCAACCTGGCGAGGTTAGGGCATTTGGGATGCTTGCTGGAGGCTCTGGAATCACCCCAATGTTTCAAGTTGCTAGAGCTATATTAGAAAACCCTAATGACAGGACCAAAGTACATCTTATCTATGCCAATGTTACGTATGAGGACATTCTTTTGAAGGAAGAGCTTGATGGTCTTGCTTCTAACTATCCAGATCGATTCAAAATATACTATGTGTTAAATCAGCCTCCTGAGGTATGGGATGGTGGTGAAGGATTTGTGTCAAAGGAGATGATTCAAACACATTGCCCTGCTCCAGCACAAGATATTAAGATATTGAGATGTGGCCCCCCACCTATGAACAAGGCCATGGCTGCTCACCTTGAAGCCCTTGGATATGCTCCTGAGATGCAGTTCCAGTTCTGA	837	0.4444	MDFLQAPENQILVGVAVAVVAIGLGAVYLYSSKKRKGCLDPLNFKVFKLVKRAQLSHNVAKFTFALPTPTSVLGLPIGQHISCRGKDAQGEDVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLSVKGPKGRFKYQPGEVRAFGMLAGGSGITPMFQVARAILENPNDRTKVHLIYANVTYEDILLKEELDGLASNYPDRFKIYYVLNQPPEVWDGGEGFVSKEMIQTHCPAPAQDIKILRCGPPPMNKAMAAHLEALGYAPEMQFQF*	279

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso19g1003	278	SUPERFAMILY	Riboflavin synthase domain-like	35	147	IPR017938	-
	Gso19g1003	278	CDD	cyt_b5_reduct_like	47	278	-	-
	Gso19g1003	278	Gene3D	Translation factors	37	136	-	-
	Gso19g1003	278	Pfam	Oxidoreductase FAD-binding domain	47	145	IPR008333	-
	Gso19g1003	278	PRINTS	Cytochrome B5 reductase signature	73	84	-	-
	Gso19g1003	278	PRINTS	Cytochrome B5 reductase signature	95	102	-	-
	Gso19g1003	278	PRINTS	Cytochrome B5 reductase signature	131	145	-	-
	Gso19g1003	278	PRINTS	Cytochrome B5 reductase signature	154	173	-	-
	Gso19g1003	278	PRINTS	Cytochrome B5 reductase signature	192	203	-	-
	Gso19g1003	278	PRINTS	Cytochrome B5 reductase signature	248	256	-	-
	Gso19g1003	278	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	2	278	-	-
	Gso19g1003	278	SUPERFAMILY	Ferredoxin reductase-like, C-terminal NADP-linked domain	134	274	IPR039261	-
	Gso19g1003	278	Pfam	Oxidoreductase NAD-binding domain	155	261	IPR001433	GO:0016491
	Gso19g1003	278	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	154	173	IPR001709	GO:0016491
	Gso19g1003	278	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	192	203	IPR001709	GO:0016491
	Gso19g1003	278	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	248	256	IPR001709	GO:0016491
	Gso19g1003	278	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	2	278	IPR001834	GO:0016491
	Gso19g1003	278	Gene3D	-	137	278	IPR039261	-
	Gso19g1003	278	ProSiteProfiles	Ferredoxin reductase-type FAD binding domain profile.	42	146	IPR017927	GO:0016491

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso19g1003	Gso-Chr19	37570982	37575606	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso19g1003	2	278	NADPH P450 reductases	AT5G17770	84.892	3.16e-171	473

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso19g1003	K00326		-	gmx:100816447	558.525