Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0998 ATGGAAGATCAGGGTCAGCAGCAGCAACAACAGGAGGCAAAGAGTCCAAGGCAAGGCACCGAGAGGAGTGAAGCGGTTCGGTCAAGGTGGACTCCAAAGCCAGAACAAATCCTCATTCTCGAGTCCATCTTCAACAGTGGCATGGTGAACCCTCCCAAGGACGAAACCGTCAGAATAAGGAGGCTTCTCGAGAAATTCGGCGCCGTTGGCGACGCCAACGTCTTCTACTGGTTCCAAAACCGCCGCTCGAGATCCCGCCGCCGCCAGCGCCAGATGATGCAGCAGGCTGCTGCCGCCGCCACCGCCACCACCATTGACCACCCTCAGGCTCAGGCTCAGACTCTTGTTGGTGGTGCAATTCCACTTGATCACACCACTCAAGGAAACCTTGTTGTTGCAAGTAGTGCTACTTCAACCATGGGGTTTGGTTGTTCTTCTTCTCCATCTTACGCTTTCCTTGGTTCCTCTTCTTCATCTTGTGGTGGTGGTGTAATTGGTGGCCATCAACAAGGCATGGAGGGTTTCTTCTCAGTTTCTTCTCAAATGGGTTTCCCTGATCACCACACTTCACCTGCATCATCAGCTTTCTACCCTCCTCTTGATCCAAATTTGACCTACCAGGCTGGATATGGGGGCACTAATATTTCGGGATTCATCACAGTGTTTCTCAATGGGATTGCAACAGAACTTCCAAAGGGGCCAATAGACCTCAAAACCGTGTTCGGAGAGGATGTAATGTTAGTTCATTCCTCTGGAGTGCCAATTCCCACCAATGAATTTGGGTTCTTGATGCAGAACCTTCGGCATGGCGAAAGCTACTTTCTGGTATCAAAGCCAACATAA 843 0.5077 MEDQGQQQQQQEAKSPRQGTERSEAVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRRLLEKFGAVGDANVFYWFQNRRSRSRRRQRQMMQQAAAAATATTIDHPQAQAQTLVGGAIPLDHTTQGNLVVASSATSTMGFGCSSSPSYAFLGSSSSSCGGGVIGGHQQGMEGFFSVSSQMGFPDHHTSPASSAFYPPLDPNLTYQAGYGGTNISGFITVFLNGIATELPKGPIDLKTVFGEDVMLVHSSGVPIPTNEFGFLMQNLRHGESYFLVSKPT* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0998 280 MobiDBLite consensus disorder prediction 1 30 - -
Gso19g0998 280 SMART HOX_1 25 92 IPR001356 GO:0003677
Gso19g0998 280 ProSiteProfiles 'Homeobox' domain profile. 23 88 IPR001356 GO:0003677
Gso19g0998 280 MobiDBLite consensus disorder prediction 1 16 - -
Gso19g0998 280 SUPERFAMILY Homeodomain-like 22 94 IPR009057 -
Gso19g0998 280 Pfam Homeodomain 27 87 IPR001356 GO:0003677
Gso19g0998 280 PANTHER WUSCHEL-RELATED HOMEOBOX 11 2 279 IPR044558 GO:0003700|GO:0048830
Gso19g0998 280 Gene3D - 27 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0998 Gso-Chr19 37474294 37476659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0998 2 276 Wox Gene Family AT3G03660 50.877 5.71e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gso19g0998 Homeodomain 1.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0998 - - gmx:100791266 476.478