Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0990 ATGCCCTCCACCATGGTTTCTCTCTCCAAACGCATGGGGTTCACCTTGTTCTTGAACACCTCCTTCCTCGTGATTGTGTTTTGTGTTTCTCTTATTGTTCCCTTCCACTCTTCATCAGAACACGTTGTTCTGAGGAGCAACAGGGTTGGTTTGAGGGGTGAAGAACAAGATTGCAAGAGTTTCCACAGTTTGGAGGACTCCAAAGCCAAGTGCTTGTACTTGAAATCCAATGATCCATGTGTCTCTCAGGGCTATGTTGACTACCTTTACCTTTTCTATTGCAAATTTGGGGGTTTCCCTCTGTTGGGTCACTCTCTTTTGTTTCTTTGGCTTTTGGTTCTGTTCTATTTGTTGGCCAACACTGCCTCTGAGTACTTTTGTCCTTCTCTTGACAACTTGTCCAAATTGCTGAGGCTCTCTCCCACAATTGCTGGGGTGACCCTTCTCTCTCTTGGAAATGGTGCTTGTGATGTTTTTGCCACCCTTGTCTCTTTCAAGGGTAGTGGGACCCGTGACATTGGCTTCAACACTGTGCTTGGGGGTGCTTCCTTTGTGTCCTGTGTGGTGGTTGGAATAGTGAGCATTGCAATAAGGCATAGGGGGATCCGGGTTAAGAAGTGGGACTTGGTGAGAGATGTTTGTTTCCTCCTCTTGGTTCTTCTGTGCTTGTTAACCATTTTGATTGCTGGTGAGATTAATGTTCCTGGGGCAATTGGGTTTTGCTTGATGTATGCGGTGTATGTGGTTGTTGTTTATGTCTTGTCTACCCGAGGGAACAAGGGTGTGTGTGGAGATGCTGATGGTGAAATTGGTTGTGATTTATCTGTTCCTATGCTCAGTGGGATGGAGAAAGGACTTGTAAATGGAGCTCAGGAATGTAACATGAAAATTGAGAGGAAACGTTGTTGTTTACAATCTTCAATGTGTAGTATGTTACTCTTTGTCTTGGAGATGCCACTTTACTTGCCTAGGAGATTGACAATTCCTGGTGTTTGTGAAGAGAGATGGTCCAAAGTTTATGCAGTTTGTTCAGCTATGCTAGCACCACTTCTCTTGTCTTTCTTGTGGATACCTAATCATCTAAACGGCTTCAACAGCATTATTGTTTATGGAATTGGATTGTTGATTGGGATTATATTAGGGGTTATTGCATTTTTCACAACCAATGTGTCAAACCCTCCAAGGAAGTACTTGCTTCCTTGGCTTGCAGGAGGGTTTGTGATGAGTGTGACTTGGAGCTACATTTCAGCTCAGGAATTGGTGGGATTGTTGGTTTCACTTGGTTACATATGTGGAGTTAGTCCTTCAATACTCGGGCTAACAGTTCTTGCTTGGGGGAATTCACTTGGGGATTTGGTGACAAATTTGACAATGGCTTTGAATGGTGGATCAGAAGGTGCTCAAATAGCAATATCAGGTTGTTATGCTGGCCCTATTTTCAACATAGTAGTTGGATTGGGCTTATCTCTTGTGAGCTCTTCTTGGTCTGAGTACCCTTTATCTGTTGTGATCACTAGAGACCCATATCTGTGGGAAACATTGGCACTTTTGGGGGTTGGATTGGTTTGGGCACTTGTCGTGCTGATTAGAAGAGACATGAAGCTTGATGCACTATTGGGAGGAGGGCTTTTGGTTATTTACTTCATTTCTCTATTCCTGAGGCTGATTCAGACACTTGGTTCTCTCCAATTTCAGCATATGTTGTTAGGCTTATTCTTCAGCAGATGA 1728 0.4369 MPSTMVSLSKRMGFTLFLNTSFLVIVFCVSLIVPFHSSSEHVVLRSNRVGLRGEEQDCKSFHSLEDSKAKCLYLKSNDPCVSQGYVDYLYLFYCKFGGFPLLGHSLLFLWLLVLFYLLANTASEYFCPSLDNLSKLLRLSPTIAGVTLLSLGNGACDVFATLVSFKGSGTRDIGFNTVLGGASFVSCVVVGIVSIAIRHRGIRVKKWDLVRDVCFLLLVLLCLLTILIAGEINVPGAIGFCLMYAVYVVVVYVLSTRGNKGVCGDADGEIGCDLSVPMLSGMEKGLVNGAQECNMKIERKRCCLQSSMCSMLLFVLEMPLYLPRRLTIPGVCEERWSKVYAVCSAMLAPLLLSFLWIPNHLNGFNSIIVYGIGLLIGIILGVIAFFTTNVSNPPRKYLLPWLAGGFVMSVTWSYISAQELVGLLVSLGYICGVSPSILGLTVLAWGNSLGDLVTNLTMALNGGSEGAQIAISGCYAGPIFNIVVGLGLSLVSSSWSEYPLSVVITRDPYLWETLALLGVGLVWALVVLIRRDMKLDALLGGGLLVIYFISLFLRLIQTLGSLQFQHMLLGLFFSR* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0990 575 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 6 563 - -
Gso19g0990 575 Gene3D - 139 265 IPR044880 -
Gso19g0990 575 Gene3D - 306 555 IPR044880 -
Gso19g0990 575 Pfam Sodium/calcium exchanger protein 108 252 IPR004837 GO:0016021|GO:0055085
Gso19g0990 575 Pfam Sodium/calcium exchanger protein 402 554 IPR004837 GO:0016021|GO:0055085
Gso19g0990 575 PANTHER CATION CALCIUM EXCHANGER 6 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0990 Gso-Chr19 37287467 37290096 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0990 9 563 Antiporters AT5G17850 53.616 1.24e-171 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0990 K13754 - gmx:100787016 1019.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0990 19 37287467 37290096 Gso16g0295 16 3349294 3351639 GST