Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0989 ATGGCAGCCTTATTCATCTCAAAGTCCAAGCTTCAATCCACAGTACTTGTTCTTGTCCTAAACCTATCTTTCTTTTTCCTCTTCTGTCTCCTTCTAAAGGTTTATTATCTCCAACCTCCTAATAACTCGAATTCTCAATCTAATGGCCCCCTCAAAATCTTCAACCATGCAAGATTGTTCAGAGATGTTAGTGTTGAAGGCTGCACTGACCTCCACAAGTACTCAGATTACGAGTCAAAGTGTTTATATGTGAAGAACTATCTTGACTGCAGGTCAAAAGGGTACATAAACTATCTCCAAATCTTCTATTGCAGCTTTGGAAAATTCCAAATTTTGGGACAAACCCTACTTGCCTTGTGGCTTGTGGTGTTGTTCTATCTTTTGGGGGACACAGCTTCCAACTACTTCTGCAACTCCTTGGAAGGCTTGTCCAACATCTTGAGGCTCTCCCCCACCATTGCAGGGGTGACCCTTCTCTCATTGGGAAATGGTGCTCCTGATTTCTTCGCCAGTGTTGTGTCCTTCACTGGATCATCCACCAATGGTGCTGTTGGACTCAACAGCATCCTTGGAGGGTCTTTCTTTGTGTCCTGTGCTGTCTTGGGGATCATAAGCATTCTTGTTGGCCCAAATCAGGTTCAAGTTGATAAGGCCAGTTTCATTAGGGATGTGCTTTTCTTCCTTTTCTCACTTCTTATCCTTCTCATCATCCTTTACATTGGTAAAATCACTTTGTTGGCTTCAATATGCTATGTTTCCATCTACTTCCTCTATGTCTGTGCTGTCTCAGCCACACATCTCATCTATGGAGGGGACAGAATGAATGAAAGGCAATACCAATACTCAACATTCTCTGATGAGGAATCACTAGAGGCTAGCATACCTTTGTTAGGCTATGTTGATGAAGAGAAACAAAGTTTGGCAGAGATAGTGGTGGTGGTTGATGACAAGGACCAAAACCAAAAGCAAGATAGTGCTATTTTTTTGGGTAACAATTCATTGTTTGATTGTATTTACATGGGAAAAATCCTGCAAGTGCTAGAACTACCTCTTGGCTTACCAAGAAGGCTAACAATCCCAGTGGTGAGTGAGGAGAAATGGTCAAAGCCATATGCAGTAATTTCAGTCACATTGGCACCGGTTTTGTTGGCAATTCTTTTCAACACACAAAGTGAAAACGTGGGTTCAAGGAGTGGTCTTGTTACATACATAGTAGCTGCATTGATTGGGATAGTTTTGGGCAACATGGCATGCGTGACAACTGAGAGGTGCACCCCACCAAGAAAGTCCTTGTTCCCTTGGCTTGCTGGTGGCTTTGCCATGAGTGTAACATGGACTTACATAATTGCTGAGGAGCTTGTTTCTCTCTTGGTCTCAATTGGGAGCATCATTGGGGTTAGCCCTTCAATTCTAGGACTAACTGTCCTAGCTTGGGGCAACTCGCTTGGTGACTTGATTGCCAATGGTGCCATGGCCATGAATGGTGGGCCTGATGGGGTCCAAATGGCCATTTCTGGCTGCTATGCTGGCCCAATGTTTAACACCTTGATGGGATTGGGCTTACCCCTTGTTCTCTCAGCTTGGTCTGAGCATCCAGACCCTTATGTCACTCCTAAGGACACTTCACTCTATGAGACCCTTTTGTTCTTGATGGGAGGGGTGCTTTGGGCACTTGTGATTTTGCCTAAGAAGAATATGAGGCTTGATAAATCCTTGGGGGCAGGCCTATTGAGTGTGTACCTTTGCTTTTTGGTCATAAGGATAGCCATGGCTGTTGGAATTGTGAAATTTTAG 1794 0.4404 MAALFISKSKLQSTVLVLVLNLSFFFLFCLLLKVYYLQPPNNSNSQSNGPLKIFNHARLFRDVSVEGCTDLHKYSDYESKCLYVKNYLDCRSKGYINYLQIFYCSFGKFQILGQTLLALWLVVLFYLLGDTASNYFCNSLEGLSNILRLSPTIAGVTLLSLGNGAPDFFASVVSFTGSSTNGAVGLNSILGGSFFVSCAVLGIISILVGPNQVQVDKASFIRDVLFFLFSLLILLIILYIGKITLLASICYVSIYFLYVCAVSATHLIYGGDRMNERQYQYSTFSDEESLEASIPLLGYVDEEKQSLAEIVVVVDDKDQNQKQDSAIFLGNNSLFDCIYMGKILQVLELPLGLPRRLTIPVVSEEKWSKPYAVISVTLAPVLLAILFNTQSENVGSRSGLVTYIVAALIGIVLGNMACVTTERCTPPRKSLFPWLAGGFAMSVTWTYIIAEELVSLLVSIGSIIGVSPSILGLTVLAWGNSLGDLIANGAMAMNGGPDGVQMAISGCYAGPMFNTLMGLGLPLVLSAWSEHPDPYVTPKDTSLYETLLFLMGGVLWALVILPKKNMRLDKSLGAGLLSVYLCFLVIRIAMAVGIVKF* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0989 597 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 6 597 - -
Gso19g0989 597 Pfam Sodium/calcium exchanger protein 435 588 IPR004837 GO:0016021|GO:0055085
Gso19g0989 597 Pfam Sodium/calcium exchanger protein 118 261 IPR004837 GO:0016021|GO:0055085
Gso19g0989 597 PANTHER CATION/CALCIUM EXCHANGER 1 6 597 - -
Gso19g0989 597 Gene3D - 149 276 IPR044880 -
Gso19g0989 597 Gene3D - 370 590 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0989 Gso-Chr19 37272205 37274603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0989 45 596 Antiporters AT5G17860 49.283 1.54e-175 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0989 K13754 - gmx:100811635 1076.62