Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0987 ATGGCAGAAGATGATTCAAAGCCTCTGAACTACATCTCCGAAGTCATACTCAAGAAGAGGAAAAGCACCGAAGCATGGGCGTTAAGGAAAAAAGAACAGTTCCAGCAAAAGAAATTCCAATCCATCAGAAAGCCCGAGGATTTCATCCACGAGTATCGCAACAAGGAAGTGGACCTTATAAGAATGAAGCGGAGGGTGAAGAGGAAAGTGCCTGAAGCTAACTCCAACACTATGATAATCATTCGGATACAGGGGAAAAAAGACATGCATCCTAGGACTAGGAAGGTGTTGTACAGCTTGGGGTTGAGGAGAAGGTTCAGTGCTGTGTTTGTGAAGCCAAGTGAGGGAATAATGGCCAAGCTGCAGAGGGTGGAACCATATGTCACCTATGGATATCCTAATCTTAAAAGCATAAAGGAGCTAATTTACAAAAAAGGACATGCAAGGATGGAACAGCGAAAAGTTCCCTTGACGGATAATAACATTATTGAGCAGGAATTAGGAAAGTTCGGTATTGTATGCATAGAAGACATGGTTCATCAGATTTATAATGCTGGTCCACACTTTAAGGAAGTTGCCAGATTTATGTGGCCCTTTGAGCTGAACAAGCCAGCTGAAGGATTGAAAGGATCAAAAACCATATTCAAGGAAGGTGGAGACACAGGGAACCGTGAGGATCTCATCAATGAACTAATCAATAAAATGAATTAG 711 0.4219 MAEDDSKPLNYISEVILKKRKSTEAWALRKKEQFQQKKFQSIRKPEDFIHEYRNKEVDLIRMKRRVKRKVPEANSNTMIIIRIQGKKDMHPRTRKVLYSLGLRRRFSAVFVKPSEGIMAKLQRVEPYVTYGYPNLKSIKELIYKKGHARMEQRKVPLTDNNIIEQELGKFGIVCIEDMVHQIYNAGPHFKEVARFMWPFELNKPAEGLKGSKTIFKEGGDTGNREDLINELINKMN* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0987 236 PANTHER 60S RIBOSOMAL PROTEIN L7 3 236 IPR039699 -
Gso19g0987 236 CDD Ribosomal_L7_archeal_euk 80 236 IPR035808 -
Gso19g0987 236 Gene3D - 180 236 IPR036919 -
Gso19g0987 236 Gene3D - 77 179 IPR036919 -
Gso19g0987 236 Pfam Ribosomal protein L30p/L7e 79 128 IPR016082 -
Gso19g0987 236 TIGRFAM uL30_euk: 60S ribosomal protein uL30 20 236 IPR005998 GO:0000463|GO:0003735|GO:0022625
Gso19g0987 236 SUPERFAMILY Ribosomal protein L30p/L7e 79 236 IPR036919 -
Gso19g0987 236 PANTHER 60S RIBOSOMAL PROTEIN L7-1 3 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0987 Gso-Chr19 37163918 37166649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0987 1 236 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 53.846 1.25e-87 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0987 K02937 - gmx:100500005 471.855