Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0928 ATGGGAAACCCAGAATCCAATTTGCCACCCGGTTTTAGGTTCCACCCAACCGATGAGGAGCTCATTCTTCACTACCTTAGTAAAAAGGTAGCATCCATACCCTTGCCCGTTTCCATCATTGCAGAGGTTGATATCTACAAGTTAGATCCATGGGACTTACCAGCTAAGGCAACCTTTGGGGAGAAAGAATGGTATTTTTTTAGTCCTAGAGACCGAAAGTACCCTAATGGTGCAAGGCCAAACAGGGCAGCTGCTTCAGGTTATTGGAAGGCCACTGGCACTGATAAGACCATAGTGACATCATTGCAAGGAGGAGCACAAGAGAGCGTTGGTGTGAAGAAGGCTTTGGTGTTCTACAAAGGAAGACCCCCAAAGGGTGTGAAGACCAATTGGATCATGCATGAATATCGCCTTGTAGACAACAACAAACCCATTAAGCTCAAAGACTCCTCCATGAGATTGGATGACTGGGTTCTGTGCCGGATTTACAAGAAATCCAAACATCCTCTAACTTCAACAGAGGCATCAATAGGGGTAGGTGATGTAGATCAAGCAGAGGAGCACGTATTCAAAGAGACCCTTTTGCCAATCTCAAAATCTCCAACACCTCCACCTCAAAACACATTGATATCTCAGAAATCTGTGTCCTTCTCCAACTTGTTGGATGCCATGGACTACTCTATCCTAAGCAGTTTCTTATCTGAAAATCATACCACCCACCCACCAGGGGTTGGATCAAGTACAGGCTTCAACACTGGGAATTTGGATCAGCAACCATCTCCAATCGACAACAGCAATGGTTACATGTTTCAGAAGAACAACCCCCAATTGAACCCTTCAGTCTCCAACATGGAAAACATGATGAGGCCAAAGCGCCAAGTTTCAAACATGGATGAGGAAACCTTGTACCCATCAAAGAAATACCTTAGTTCCTCTTGCAACTTCCCTACTAACATCAACAACCAATACGAGAACCCACAATGGAACTACCTCATGAAGCAGTCTTTGCTGAATCAACGGTTAATGCTTGGTCCTCATCTTCAATTTCAAGGATAA 1056 0.4451 MGNPESNLPPGFRFHPTDEELILHYLSKKVASIPLPVSIIAEVDIYKLDPWDLPAKATFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVTSLQGGAQESVGVKKALVFYKGRPPKGVKTNWIMHEYRLVDNNKPIKLKDSSMRLDDWVLCRIYKKSKHPLTSTEASIGVGDVDQAEEHVFKETLLPISKSPTPPPQNTLISQKSVSFSNLLDAMDYSILSSFLSENHTTHPPGVGSSTGFNTGNLDQQPSPIDNSNGYMFQKNNPQLNPSVSNMENMMRPKRQVSNMDEETLYPSKKYLSSSCNFPTNINNQYENPQWNYLMKQSLLNQRLMLGPHLQFQG* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0928 351 Pfam No apical meristem (NAM) protein 9 138 IPR003441 GO:0003677|GO:0006355
Gso19g0928 351 PANTHER OS01G0104200 PROTEIN 6 301 - -
Gso19g0928 351 PANTHER NAC TRANSCRIPTION FACTOR 56 6 301 - -
Gso19g0928 351 MobiDBLite consensus disorder prediction 239 268 - -
Gso19g0928 351 SUPERFAMILY NAC domain 5 165 IPR036093 GO:0003677|GO:0006355
Gso19g0928 351 Gene3D NAC domain 17 169 IPR036093 GO:0003677|GO:0006355
Gso19g0928 351 ProSiteProfiles NAC domain profile. 8 165 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0928 Gso-Chr19 36154191 36156633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0928 3 351 NAC Transcription Factor Family AT3G04070 52.381 7.60e-111 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso19g0928 NAM 5.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0928 - - gmx:100301906 728.013