Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0922 ATGGGAACCACTTGTCCAGAATCTCCACCACTTCTCCAAGACCTAAGGGTTACCATCCACGAAACTTCAATGGTTTTTCCATCCAAAGAAACCGAGAAGAGGTCATTGTTCCTATCAAACATAGACAAGGTCCTCAACTTCGAAGTGGAAACGGTTCACTTCTTTGGAGCAAACAAAGATTTTCCACCCCAAAAAGTGGCCAAGATGTTCAAGAATGCTCTAGAGGATGCCCTAGTGGTCTATGACTTCTTGGGAGGAAGATTGAATCTGAACCCCGAAACCAAAAGATTAGAGATAGATTGCAATGCAAAGGGTGCTGGGTTTGTGGTGGCTTCAAGTGAGTACAAGTTAAGTGAGATTGGCCACTTGGTTTATCCCAATCCATCTTTTGCACAATTTGTTCACAAGAGTAAGGATTTCCTTCAACAAAATGATCAACCACTATGCGTTGCACAGTTGACATCCTTCAAATGTGGAGGCTTCGCAATAGGGTTCACAACCAGCCACACCACCTTCGACGGTCTAAGCTTCAAAACATTCTTGGACAACCTTGCCGCATTGGCTGCTAACAAGCCCCTGGCTGTGATACCCTGCCACGATAGGCACCTCCTGGCCGCAAGATCTCCGCCACGTGTCAGCTTCCCGCACCACGAGCTGATCAAGCTCGATAACTTACCCACAGGCAGCACCGAGTCCAGTGTCTTCGAGGCCTCTAAGGAAGAGCTCGACTTCAAAGTTTTCCAACTAACCTCACACAACATTCTCAGCCTCAAGGAGAAAGCCAAGGGTAGCACCAATGCTCGTGCCACTGGGTTTAATGTTATCACTGCCCATATATGGAGATGCAAGGCCTTATCTGCACCCTACAACCCCTCTAGGTCATCCACCATACTATATGCCGTGGACATACGTCCACGGCTGAACCCTCCCCTCCCCAAATCCTTTGCGGGTAATGCTGTGTTAACCGCGTATGCCACAGCAAAATGGGAGGAATTGGAGAAGGGAGAGTTCTCAAGCTTGGTGGGGATGGTGACAGAGGGTGCAAAGAGAATGAGTGATGAGTATACAAGGTCTATGATAGACTGGGGAGAGGTGCATAGTGGGTTTCCACATGGGGAGGTTTTGGTGTCTTCGTGGTGGAGATTAGGCTTTGAGGAGGTGGAGTATCCGTGGGGGAAGCCTAAGTATTGTTGTCCCGTGGTGTATCACCGGAAGGACATTATTTTAGTGTTTCCTCCTTTTGGTAGTGGGGATGATGGGATAAATATTATAGTGGCTCTTCCTCCCAAGGAAATGGACAAATTCGAGACCCTCTTTTACATGTTCTTGAATTGA 1335 0.4772 MGTTCPESPPLLQDLRVTIHETSMVFPSKETEKRSLFLSNIDKVLNFEVETVHFFGANKDFPPQKVAKMFKNALEDALVVYDFLGGRLNLNPETKRLEIDCNAKGAGFVVASSEYKLSEIGHLVYPNPSFAQFVHKSKDFLQQNDQPLCVAQLTSFKCGGFAIGFTTSHTTFDGLSFKTFLDNLAALAANKPLAVIPCHDRHLLAARSPPRVSFPHHELIKLDNLPTGSTESSVFEASKEELDFKVFQLTSHNILSLKEKAKGSTNARATGFNVITAHIWRCKALSAPYNPSRSSTILYAVDIRPRLNPPLPKSFAGNAVLTAYATAKWEELEKGEFSSLVGMVTEGAKRMSDEYTRSMIDWGEVHSGFPHGEVLVSSWWRLGFEEVEYPWGKPKYCCPVVYHRKDIILVFPPFGSGDDGINIIVALPPKEMDKFETLFYMFLN* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0922 444 Gene3D - 224 441 IPR023213 -
Gso19g0922 444 Pfam Transferase family 16 439 - -
Gso19g0922 444 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 441 - -
Gso19g0922 444 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 13 441 - -
Gso19g0922 444 Gene3D - 15 220 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0922 Gso-Chr19 35981680 35985273 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0922 15 440 Monolignol Biosynthesis Gene Families AT5G48930 28.668 1.35e-51 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0922 K13065 K15400 gmx:100780971 900.968