Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0895 ATGGTTCTGCAGTCTCTGGACGACGTTGTTCACCAGCACTTGATGGTTTCTACCAGGGCAGATAAGAGTCCGGGATCCAAAATCGTCGTAGCGAATGGCGGGAACGGAGCTAAGGCTGAGAAGAAGCGAAGAGAATCGGAGGATTCCATAATGCCGCTGCCGCGGAGGTCGAGTGCGAGGATTCAAGCGTTGCAGAAGGCGGAGGAGCTTTTTGCTCGTAAAAGAGTAGAGGGAGTTGAGGAGAAAGATAACTGTGACGACAACTTGACACCGGAGAAGGTGAAGGTAAAGAAGAGGAATAGAAAAAGTAGTGGCAGTGAGGAGAGTGTAGTGGTGGAAGTAGAGTTTGTTTCGCCGGCAAAGAAAAAGCGGGTTGCCTACCGCAAGTGTAAGGTGGTGGGAGAAATGAATGGAAATGGTAAAGGTGAAGAATTGAGTGGAAATGGTAAGGTGAGAAAAGTGAATGCGAAGGAGGAATTGGAAAATGCGGGAGGGGGTTTGGGGGAGAAGAGTGACTTGCTTAAGGTCAAAGAGACGATAAGACTGTTTACTAAGCATTACCTTCAATTAGTTCAGGAAGAAGAAAAGAGGTGTGGGAAGGCAGAGGCTGAGCGAAAAGTTGCTAAAAAGGCCTCTAAAAAGGCTTCAAAATTGAAGAAAGGTGCTCCAACTGAAGAATCAAAGAGCACTGCTAAACGACCAGATCTAAAGGCCATAAGCAAGATGATGGAAAATAATGAGATATTGTATCCTGAGAAAAGAATTGGCAACATTCCAGGTATTGAGGTTGGATATCAGTTCTATTCTCGTGCTGAAATGGTTGCAGTTGGCTTTCATAGCCACTGGTTAAATGGCATTGATTATATGGGCCAGAGCTATGCCAAAGCGTGCAGCTATGAACTTCCAGTTGCTGTTGCCATTGTTATTTCGGGCATGTATGAGGATGATCTGGATAATGCTGAGGATGTTGTGTACACTGGTCAAGGTGGGCATAATCTGACTGGTGATAAGCGTCAAATTCGGGACCAAAAGTTGGAGCGTGGTAACCTGGCTCTCAAGAACTGTGCTGAGCAATGTGTGCCTGTTAGAGTCATTCGTGGTCACGAATCTTCAAGCAGTTACACTGGTAAAGTATACACATATGATGGCTTGTACAAGGTTGTCAATTATTGGGCAGAAAAGGGAATATCTGGATTTACAGTCTACAAGTTTAGACTTAGGAGGCTCGAAGGGCAACCTACATTAACCACAAATCAGGTATATTTTACTTATGGACGTGTACCTCAAACTCTAACAGAAATACGAGGATTGGTTTGTGAGGATATCACTGGAGGTCAAGAAGATATGCCCATTCCGGCTACAAATTTGGTTGATGACCCCCCTGTTCCACCCACAGGTTTCACATATTGTAAGTCTGTTAAGGTTGCAAAAAATGTGAAGCTTCCCATGAATGCCACTGGATGCGAATGTAAAGGCATTTGTAATGACCCAACAACCTGTGCATGTGCATTGCGTAATGGCTCTGATTTTCCCTATGTATCTCGGGATGGTGGCAGGTTAGTTGAAGCTAAAGATGTAGTATTTGAATGTGGTCCGGAATGTGGTTGTGGGCCAGGTTGTGTGAACCGAACTTCTCAAAGAGGACTTAGATATCGTCTGGAGGTTTTCCGTACTGCAAAAAAAGGATGGGCTGTTAGATCCTGGGATTTTATACCTTCTGGAGCACCTGTGTGTGAGTACACAGGAATACTTGCCAGGGCAGAGGATATGGATAGCGTTTTAGAAAATAATTATATCTTTGAGATAGATTGCTTGCAAACTATAAAGGGGCTAGGGGGAAGAGAGCGGCGGTCACAAGACGGAGACATTCCTGCAAATCTTTTGGACAAATATCATGATCAATGTTCTGAAAGTGCGCCAGAGTTTTGTATTGATGCAGGATCTACTGGAAATATTGCTAGGTTTATAAACCATTGTTGTGAGCCTAATCTGTTTGTTCAATGCGTTTTGAGCACACACAATGATTTGAGATTGGCTCGTGTAATGCTGTTTGCTGCTGACAACATACCCCCTTTGCAGGAATTAACGTATGACTATGGTTATGTGCTTGATAGCGTCTTGGACTCTGATGGGAAGATCAAGCAAATGCCATGTTATTGTGGAGCCTCCGTCTGCAGGAAGCGATTATTCTAA 2193 0.4423 MVLQSLDDVVHQHLMVSTRADKSPGSKIVVANGGNGAKAEKKRRESEDSIMPLPRRSSARIQALQKAEELFARKRVEGVEEKDNCDDNLTPEKVKVKKRNRKSSGSEESVVVEVEFVSPAKKKRVAYRKCKVVGEMNGNGKGEELSGNGKVRKVNAKEELENAGGGLGEKSDLLKVKETIRLFTKHYLQLVQEEEKRCGKAEAERKVAKKASKKASKLKKGAPTEESKSTAKRPDLKAISKMMENNEILYPEKRIGNIPGIEVGYQFYSRAEMVAVGFHSHWLNGIDYMGQSYAKACSYELPVAVAIVISGMYEDDLDNAEDVVYTGQGGHNLTGDKRQIRDQKLERGNLALKNCAEQCVPVRVIRGHESSSSYTGKVYTYDGLYKVVNYWAEKGISGFTVYKFRLRRLEGQPTLTTNQVYFTYGRVPQTLTEIRGLVCEDITGGQEDMPIPATNLVDDPPVPPTGFTYCKSVKVAKNVKLPMNATGCECKGICNDPTTCACALRNGSDFPYVSRDGGRLVEAKDVVFECGPECGCGPGCVNRTSQRGLRYRLEVFRTAKKGWAVRSWDFIPSGAPVCEYTGILARAEDMDSVLENNYIFEIDCLQTIKGLGGRERRSQDGDIPANLLDKYHDQCSESAPEFCIDAGSTGNIARFINHCCEPNLFVQCVLSTHNDLRLARVMLFAADNIPPLQELTYDYGYVLDSVLDSDGKIKQMPCYCGASVCRKRLF* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0895 730 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 102 730 IPR025794 GO:0016571
Gso19g0895 730 SMART G9a_1 251 412 IPR003105 -
Gso19g0895 730 Gene3D SET domain 432 730 IPR046341 -
Gso19g0895 730 Coils Coil 191 211 - -
Gso19g0895 730 ProSiteProfiles YDG domain profile. 256 408 IPR003105 -
Gso19g0895 730 ProSiteProfiles SET domain profile. 551 700 IPR001214 GO:0005515
Gso19g0895 730 MobiDBLite consensus disorder prediction 209 234 - -
Gso19g0895 730 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 70 729 - -
Gso19g0895 730 SMART preset_2 439 535 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gso19g0895 730 Gene3D - 239 425 IPR036987 -
Gso19g0895 730 Pfam Pre-SET motif 443 543 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gso19g0895 730 ProSiteProfiles Pre-SET domain profile. 486 548 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gso19g0895 730 SUPERFAMILY SET domain 435 706 IPR046341 -
Gso19g0895 730 MobiDBLite consensus disorder prediction 24 50 - -
Gso19g0895 730 Pfam SAD/SRA domain 255 412 IPR003105 -
Gso19g0895 730 Pfam SET domain 562 700 IPR001214 GO:0005515
Gso19g0895 730 SUPERFAMILY PUA domain-like 238 428 IPR015947 -
Gso19g0895 730 MobiDBLite consensus disorder prediction 218 234 - -
Gso19g0895 730 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 70 729 - -
Gso19g0895 730 SMART set_7 551 706 IPR001214 GO:0005515
Gso19g0895 730 SMART PostSET_3 714 730 IPR003616 -
Gso19g0895 730 ProSiteProfiles Post-SET domain profile. 714 730 IPR003616 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0895 Gso-Chr19 35192274 35226637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0895 242 730 EF-hand Containing Proteins AT5G13960 67.210 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gso19g0895 SAD_SRA 5.5e-51 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0895 K11420 - gmx:100796701 1416.75