Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0850 ATGATGGGTAGTTGCCCTTGTTTCGGGTTGTGGAGCTGGAAGACCAAAGGGAAGACCGTCAAGGCTCAGGAGGAACAAAACAAGAATCGCAAATCTCTCGATGTCTCTGAAACTTCTTCAGGACTTGGACCAGAAGAAAACCCAACAGAGAGTGACAGTTCTCATAAGGCTCAGATATTTACCTTCCGAGAGCTTGCAACAGCAACAAAAAATTTTAGGGATGAAACCTTTATTGGGCAAGGTGGATTTGGCACTGTTTATAAAGGAACAATCGGAAAAATAAATCAGGTTGTAGCTGTTAAAAGACTTGATACTACTGGTGTCCAAGGGGAGAAAGAATTTCTGGTGGAAGTTCTCATGCTTTCCCTTCTACGCCATTCCAACCTTGTTAATATGATTGGTTACTGTGCTGAAGGGGATCAACGTCTTCTTGTGTATGAGTACATGGCTTTAGGATCTTTAGAATCTCATCTTCATGATGTTTCACCTGATGAAGAACCACTCGATTGGAATACCAGAATGATGATAGCTTTTGGGGCAGCAAAAGGACTAAATTATCTGCACCATGAAGCAAAGCCCTCTGTTATATACAGGGATCTGAAATCATCCAACATACTATTGGATGAAGGTTTCCGTCCAAAACTTTCTGATTTTGGGCTTGCAAAATTTGGTCCAACCGGAGAACAATCGTATGTTGCCACTAGGGTCATGGGAACACAAGGTTACTGTGCCCCTGAATATGCCACTAGTGGAAAATTAACGATGAGATCTGACATTTACAGTTTTGGGGTTGTGTTATTGGAACTAATTACTGGACGCAGAGCATATGATGATAATGGTGGCCCTGAAAAGCATCTTGTAGAATGGGCACGCCCAATGTTTAGAGACAAAAAGAGTTATCCAAGATTTGCAGATCCGCGGCTTAAAGGTTGCTACCCAGGAACAGCTCTCTCGAATGCCATTGAATTGGCAGCCATGTGTCTTCGTGAAGAGCCACGTCAACGGCCTAATGCAGGTCATATAGTGGAAGCTCTCAAATTCTTGTCATCCAAACCATATACCCCGAAAGTATCCATTACAGTCAACACAACAGGTATGGAGAGTGGAGATTCTCCAAAAGAAACACCAGCGATTTTGCCTCAAGAATCAGAAAGAGAGCGAGCTGTTGCAGAGGCCAAGCTGTGGGGTGAGACATGGAGGCAGAGACGACAAAGTGAGCAAAGTAGTCCTGAAGGAAGCAAATAG 1245 0.4353 MMGSCPCFGLWSWKTKGKTVKAQEEQNKNRKSLDVSETSSGLGPEENPTESDSSHKAQIFTFRELATATKNFRDETFIGQGGFGTVYKGTIGKINQVVAVKRLDTTGVQGEKEFLVEVLMLSLLRHSNLVNMIGYCAEGDQRLLVYEYMALGSLESHLHDVSPDEEPLDWNTRMMIAFGAAKGLNYLHHEAKPSVIYRDLKSSNILLDEGFRPKLSDFGLAKFGPTGEQSYVATRVMGTQGYCAPEYATSGKLTMRSDIYSFGVVLLELITGRRAYDDNGGPEKHLVEWARPMFRDKKSYPRFADPRLKGCYPGTALSNAIELAAMCLREEPRQRPNAGHIVEALKFLSSKPYTPKVSITVNTTGMESGDSPKETPAILPQESERERAVAEAKLWGETWRQRRQSEQSSPEGSK* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0850 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Gso19g0850 414 Gene3D Phosphorylase Kinase; domain 1 44 148 - -
Gso19g0850 414 CDD STKc_IRAK 78 346 - -
Gso19g0850 414 Pfam Protein kinase domain 73 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0850 414 Gene3D Transferase(Phosphotransferase) domain 1 149 362 - -
Gso19g0850 414 MobiDBLite consensus disorder prediction 363 389 - -
Gso19g0850 414 MobiDBLite consensus disorder prediction 21 55 - -
Gso19g0850 414 MobiDBLite consensus disorder prediction 33 55 - -
Gso19g0850 414 PANTHER OS07G0668900 PROTEIN 26 366 - -
Gso19g0850 414 PANTHER OS07G0668900 PROTEIN 26 366 - -
Gso19g0850 414 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Gso19g0850 414 SMART serkin_6 72 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0850 414 SUPERFAMILY Protein kinase-like (PK-like) 50 348 IPR011009 -
Gso19g0850 414 ProSiteProfiles Protein kinase domain profile. 72 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0850 Gso-Chr19 34457489 34464579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0850 7 409 Glycoside Hydrolase AT3G07070 51.306 4.11e-142 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gso19g0850 Pkinase 3.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0850 K13430 - gmx:100809298 839.721