Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0845 ATGGAAGTCTTAAACCCAATTGAAGGCAAGACCTACAAGCTCCCAGTTGGATACAGATTTGATCCAAGTGATGAAATTCTTGCTGGTTACTACCTTAGGAAGAGGATCATGGCCCAACCACTCCCTAATGACCTCATTCAAGACTGTGATGTTTACCAAACAGTGCCCTGGGAGCTGCCAGGAGGTGGTAATAAGTATTTGAATTGGCAGAGGTTTTTCTTCCATGATTTGAGGACCCGTGTGTTCGATAACCTTAACAAGAGAGAAGCCGGGAACGGTCAATGGAGAACAATAGAGGAAGCTCAAGATGTTGAGCTCTCTAACGATCAGGTTGTGGCAAAAAGGAACGTTTTGGCTTTCTGGGAGGCCAAGGGCAATGGTTTTGCCAAATCTAATTGGCTGATGCATGAATTTCGCCTTGTGTCGAAATCACTTCCTTCCATGGTGTCTTCTGTGGCTGTGTACCGCATATTCGAGAAGAAGGAGGGAAGAAAGGGAAAGAAGGCGAAAGGGTCTGAAGGGGAGACCTCTAGCAGCAGCAGCAGTGAGGAAGAAGTTATGGATGAGGCACCCATTGTCATTGATTTCACAATGGAGAGTTGCATTGGGACTGGTCCTCCCTCTCCTGCTACTAGTGAAAATTCCTAA 648 0.463 MEVLNPIEGKTYKLPVGYRFDPSDEILAGYYLRKRIMAQPLPNDLIQDCDVYQTVPWELPGGGNKYLNWQRFFFHDLRTRVFDNLNKREAGNGQWRTIEEAQDVELSNDQVVAKRNVLAFWEAKGNGFAKSNWLMHEFRLVSKSLPSMVSSVAVYRIFEKKEGRKGKKAKGSEGETSSSSSSEEEVMDEAPIVIDFTMESCIGTGPPSPATSENS* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0845 215 Pfam No apical meristem (NAM) protein 15 140 IPR003441 GO:0003677|GO:0006355
Gso19g0845 215 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 14 174 - -
Gso19g0845 215 ProSiteProfiles NAC domain profile. 14 160 IPR003441 GO:0003677|GO:0006355
Gso19g0845 215 SUPERFAMILY NAC domain 11 160 IPR036093 GO:0003677|GO:0006355
Gso19g0845 215 MobiDBLite consensus disorder prediction 165 189 - -
Gso19g0845 215 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 14 174 - -
Gso19g0845 215 Gene3D NAC domain 23 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0845 Gso-Chr19 34309210 34310904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0845 1 168 NAC Transcription Factor Family AT5G13180 33.526 1.89e-22 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso19g0845 NAM 1.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0845 - - gmx:100807171 393.275