Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0842 ATGGAGAATCATGATAATAACCTTGCAGAGAATGAGAATTCGGGCACTAACGAAACCGAAGAGACGCTACCTTCTTCTTCTTCTTCGATCACCGATCATGAAGAAGCCGATCCCAAACCTGATGATGATGTTGCTGCTGCTACCACCGCCGAAGCAGAACCACCATCTCCAAAGAAAGATGATGAGGAGGCAGAGGAAGAGAAGAAAGAAGAAACTGCTGCATCTCCTGCTTCTCCTCCGCCAAGCCTCGAGAATGTTTCAGAGGAGATTGACCAGTTTCTCGTGACTCTGAAGCAGAAAAATGATGAAAATGCTGCGGAGAAGATGGATTTTGAGATTCCTGGCTTTTTTGAGAGGTACTCGGATCTGGTGGAGAAGAAGATAGCGAAATACGATGCGAAAGGGAAGGCAAAATGGGGAGAGGTGGCGGAGGAAGATTCGTGGTTGCTTGAAACCGCGAATCGGATTTCGAAGCTGATCATGTTGATGAAAGATCATCATCATGTTGAACCAGAGGAGAAAGAGATCGACGGTGGAAATGGAAATGGAAAAGACTCGCTGGTGAATCGCGTTACCTCGATTCACCAGCGTGTGATGTCGTATTTGGAGGAGGACTTCAGATTTCTAATGGAAGAATGTAGAATCCCAACCGAATTGGATCCAGGAGGCAATAATAATAACAACAACGACACCAAAGGGAAACAACAACAACAGGTGCCATCATCGGAACAAGAAGAAGTGAAAGATCAAGAAGGCGAAATCGACGAAAGTTTCCCGGGTTATTCTGATGAGACCATTGCCAGCCTGAGCAAGATCGCCGGCGAGATGATATCCGGCGGCTACGAATCGGAGTGCTGCCAGGTGTACATCATCTCGCGGAGGAACGCGTTCGAGGAGGTTCACAAGAAGCTAGGGCTGGAGAGGATCAGCATCGACGACATGGTTCTAAAGGTGCAGTGGGAGACTCTGGCCGGGAACATGATTCCAGCCTGGATCAACACGCTCAAGCAGTGCGCGGCGGTGTACTTCCCCGGCGAGCGGAAGCTCGCCGAGGCCGTGTTCGCCAGCTGCCCCTCGGTCGCGGCGGGGCTCTTCGGCAGCCTCTCCCGCGGCGTGGTGATCCAGCTCCTCAACTTCGCGGAGGGAGCCGCTATGACGAAGCGCGCCGCCGAGAAGCTCTTCAAGCTCCTCGACATGTACGAGACCCTCCGTGAGATCATCCCCAAGGTGAACGGGCTATTCCCGGAGGAGTCTGTCGAGGAGCTGAAGACGGAGATGAATATCGCCAAGTCACGACTTGGCGAGGCGGCCATCTCCATCTTCTGCGATCTGGAGAACCAGATCAAACAGGAGACCGCGAGAACCGCGGTCCCGGGTGGCGCAGTGCACCCCCTAACACGCTACATAATGAACTACCTCAGCGTGGCGGGAGATTACAAGGAAACCCTAGAGCAAGTCTTCAAAGACCACTCCAAGATCGAACGTGCAGACTCCACCAGTAGGCCACACAACGAGAACGACGGCGTGCCGGAGAAGCAAGCATCGTCGCCGTTCGCGGCGCAGGTGCTGAGAGTCATGGACTTGCTAGACTCAAGCCTAGAAGGCAAAGCTCGTTTATACAAAGACGTGGCGCAGAACAATTTCTTCATGATGAACAACGGAAGGTACATTCTGCAGAAGATAAAAGGATCAAGCGAGATGAGCCAGGTGATGGGTGACACGTGGATCAGGAAGAAATCCTCTGAGCTGAGAACATACCACAAGAACTACCAGAGAGAAACGTGGAATAGGGTTCTGGCGTGTCTGAACCCGGAAGGGTTGAACGTGAACGGGAAGGTGCAGAAGCCGGTGCTGAAGGAGAGGTTCAAGAGCTTCAACTCGTTGTTTGATGAGATACACAGGACGCAGAGCTCGTGGGTGGTGAAGGACGAGCAGCTTCAGTCGGAGCTTAGGGTTTCGATCTCGGGAGTGGTGGTTCCGGCGTACAGGGCCTTCATTGGGAGGTTTGCGCAGATCTTTGACCCGGGAAGACAGACTGAGAAGTACATAAAGTACCAACCTGAAGATATTGAGACTTACATTGATGAGTTGTTTGATGGGAAGCCTCATCAGTCCATTGCTAGGAGGAGAACATAA 2136 0.5201 MENHDNNLAENENSGTNETEETLPSSSSSITDHEEADPKPDDDVAAATTAEAEPPSPKKDDEEAEEEKKEETAASPASPPPSLENVSEEIDQFLVTLKQKNDENAAEKMDFEIPGFFERYSDLVEKKIAKYDAKGKAKWGEVAEEDSWLLETANRISKLIMLMKDHHHVEPEEKEIDGGNGNGKDSLVNRVTSIHQRVMSYLEEDFRFLMEECRIPTELDPGGNNNNNNDTKGKQQQQVPSSEQEEVKDQEGEIDESFPGYSDETIASLSKIAGEMISGGYESECCQVYIISRRNAFEEVHKKLGLERISIDDMVLKVQWETLAGNMIPAWINTLKQCAAVYFPGERKLAEAVFASCPSVAAGLFGSLSRGVVIQLLNFAEGAAMTKRAAEKLFKLLDMYETLREIIPKVNGLFPEESVEELKTEMNIAKSRLGEAAISIFCDLENQIKQETARTAVPGGAVHPLTRYIMNYLSVAGDYKETLEQVFKDHSKIERADSTSRPHNENDGVPEKQASSPFAAQVLRVMDLLDSSLEGKARLYKDVAQNNFFMMNNGRYILQKIKGSSEMSQVMGDTWIRKKSSELRTYHKNYQRETWNRVLACLNPEGLNVNGKVQKPVLKERFKSFNSLFDEIHRTQSSWVVKDEQLQSELRVSISGVVVPAYRAFIGRFAQIFDPGRQTEKYIKYQPEDIETYIDELFDGKPHQSIARRRT* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0842 711 MobiDBLite consensus disorder prediction 492 514 - -
Gso19g0842 711 MobiDBLite consensus disorder prediction 220 243 - -
Gso19g0842 711 Gene3D Exocyst complex component Exo70 150 708 - -
Gso19g0842 711 MobiDBLite consensus disorder prediction 217 260 - -
Gso19g0842 711 Pfam Exo70 exocyst complex subunit 330 696 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gso19g0842 711 MobiDBLite consensus disorder prediction 32 46 - -
Gso19g0842 711 Coils Coil 83 103 - -
Gso19g0842 711 SUPERFAMILY Cullin repeat-like 150 699 IPR016159 -
Gso19g0842 711 PANTHER EXOCYST COMPLEX PROTEIN EXO70 67 707 IPR004140 GO:0000145|GO:0006887
Gso19g0842 711 MobiDBLite consensus disorder prediction 492 508 - -
Gso19g0842 711 MobiDBLite consensus disorder prediction 1 85 - -
Gso19g0842 711 MobiDBLite consensus disorder prediction 8 31 - -
Gso19g0842 711 MobiDBLite consensus disorder prediction 54 73 - -
Gso19g0842 711 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 67 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0842 Gso-Chr19 34137021 34139587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0842 1 711 EXO70 exocyst subunit family AT5G13990 45.257 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0842 K07195 - gmx:100820172 1295.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0842 19 34137021 34139587 Gso16g0431 16 5015018 5017585 GST
Gso19g0842 19 34137021 34139587 Gso2g0541 2 5711796 5714289 PCT
Gso2g0541 2 5711796 5714289 Gso19g0842 19 34137021 34139587 PCT