Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0836 ATGGAAATGGCTAATGAAAACGGTTTCCAACTTAGTGTGAAGCTAAGTGAACCAACTCTAGTTCCTCCTGCTGAAGAAACAAAGAAGGGTTTGTATTTCCTATCTAACCTTGACCAGAACATTGCCGTGATTGTGAGAACCGTTTATTGCTTCAAAACTGCTGAGAGGGGGAATGAGAAGGCTGGGGAAGTGATCAAGAATGCATTGAAGAAGGTTCTTGTCTATTATTACCCTCTTGCCGGGAGGCTTACAATAAGCTCAGAGGGTAAACTCATTGTGGACTGCACAGGGGAGGGTGCCTTGCTTGTGGAGGCTGAAGCAAACTGTTCAATGGAAGAGATTGGTGACATCACAAAGCCAGACCCTGGGACTCTTGGTAAGCTTGTTTATGACATTCCTGGAGCAAAACACATTCTTCAGATGCCTCCTTTGGTTGCTCAGGTGACCAAGTTCAAATGTGGAGGCTTTGCTCTTGGGCTGTGCATGAACCACTGCATGTTTGATGGCATTGGTGCAATGGAATTTGTGAACTCTTGGGGAGAAGCAGCCAGAGACTTGCCACTCTCAATCCCCCCAGTGATAGACAGAAGCATACTCAAGGCAAGAAGCCCTCCAAAGATAGAGCACCTGCACCAAGAATTTGCTGACATTGAAGACAAGTCCAACACAAATAGCTTATATGAAGATGAGATGGTCTACAGGTCCTTCTGCATTGAACCTGAGAGGCTAAAGCAGCTGAAGATGAAAGCCATGGAAGATGGAGCACTTGAGAAATGCACAACATTTGAAGTCCTCTCAGCATTTGTGTGGATAGCAAGAACCAAGGCACTGAAGATGCTGCCTGACCAACAAACAAAGCTTCTTTTTGCTGTAGATGGGAGGGCCAAGTTCAACCCCACTCTCCCAAAAGGGTACTTTGGGAATGGAATTGTGCTAACAAATTCTGTGTGCCAAGCTGGTGAGCTAACAGAAAAGCCCTTCTCATTTGGAGTGAGGCTCATTCAAGATGCAATCAAGATGGTCACAGACAGTTACATGAGATCAGCTATTGATTACTTTGAGGTGACAAGAGCAAGGCCTTCTCTTGCTTGCACCCTTCTCATCACAACTTGGTCTAGGCTTTCCTTTCACACCACTGATTTTGGATGGGGTGAACCTGCTCTGTCAGGGCCAGTGTCACTGCCAGAGAAGGAAGTGATTCTGTTTCTCTCTCATGGCCAAGAGAGGAGAAACATCAATGTGCTTCTTGGTTTGCCTGCTCCTGTCATGAAGATTTTCCAAGATTTGATGCAGATGTAA 1299 0.4573 MEMANENGFQLSVKLSEPTLVPPAEETKKGLYFLSNLDQNIAVIVRTVYCFKTAERGNEKAGEVIKNALKKVLVYYYPLAGRLTISSEGKLIVDCTGEGALLVEAEANCSMEEIGDITKPDPGTLGKLVYDIPGAKHILQMPPLVAQVTKFKCGGFALGLCMNHCMFDGIGAMEFVNSWGEAARDLPLSIPPVIDRSILKARSPPKIEHLHQEFADIEDKSNTNSLYEDEMVYRSFCIEPERLKQLKMKAMEDGALEKCTTFEVLSAFVWIARTKALKMLPDQQTKLLFAVDGRAKFNPTLPKGYFGNGIVLTNSVCQAGELTEKPFSFGVRLIQDAIKMVTDSYMRSAIDYFEVTRARPSLACTLLITTWSRLSFHTTDFGWGEPALSGPVSLPEKEVILFLSHGQERRNINVLLGLPAPVMKIFQDLMQM* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0836 432 Gene3D - 8 213 IPR023213 -
Gso19g0836 432 Gene3D - 214 431 IPR023213 -
Gso19g0836 432 Pfam Transferase family 12 430 - -
Gso19g0836 432 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 12 431 - -
Gso19g0836 432 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0836 Gso-Chr19 33931301 33933983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0836 11 430 Monolignol Biosynthesis Gene Families AT5G48930 33.796 9.49e-81 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0836 K15400 - gmx:100804504 868.611