Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0829 ATGGATCCCAAGGGCTCAAAGCAGCAGCAGCCACAGGAGGTGGTACCAAAATTCCTCAGCCTCCCCCAACACCACTACCAACAACAAGGGAATTCCAACAACAACAACATGGGAGAGAACAAACCATCAGAGGTTAAGGATTTCCAGATAGTGGTAGCTGCTGAGAAGGACGAGAGCAAGAAGCAGCAACAGTTGGCACCAAAGAGGAGTTCCAACAAGGACAGGCACACCAAGGTTGAGGGCAGGGGGAGGAGGATAAGGATGCCTGCTCTCTGTGCTGCCAGAATCTTCCAGTTGACCAGAGAATTGGGCCACAAATCTGATGGGGAAACCATCCAGTGGCTCCTCCAGCAGGCTGAGCCATCCATCATAGCTGCCACTGGGACTGGCACAATCCCAGCATCTGCTCTTGCTGCTGCTGGCAACTCACTCTCACCTCAAGGTTCCTCTCTTTCATCAGCCTTACACCACCAACACCAAAAGATTGATGAATTAGGTTGTGGGTCAGGTGGGAGCAGTAGGGCCAGCTGGCAGATGGTTGGGGGGAATTTGGGGAGACCCCATTTGGGTGTGGCCACAACAGGCCTATGGCCCCCCCATGTCAGTGGATTTGGATTTCAGACAGCAACAACAACAACAACAACAACATCATCTGGTCCATCTAATGCCACCTTAGCCACTGAGAGCTCCAATTACCTCCAGAAAATTGCCTTCCCTGGCTTTGACTTGCCTACTTCTGCCACCAACATGGGTCACATGAGTTTCACCTCAATTTTGGGTGGTGCTGGTTCCCAGCAGATGCCTGGTTTGGAGCTTGGACTTTCCCAGGATGGCCATATTGGGGTGCTGAATCCACAGGCCTTGAACCAGATTTATCAGCAGATGAATCATCAGGCTCAAGCTGGTAGAGTGCATCAACAGCATCAGCATCAGCAACAACAGCATCAGCAAACTCCTGCTAAGGATGATTCTCAAGGCTCAGGAGGACAGTAG 993 0.5156 MDPKGSKQQQPQEVVPKFLSLPQHHYQQQGNSNNNNMGENKPSEVKDFQIVVAAEKDESKKQQQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGNSLSPQGSSLSSALHHQHQKIDELGCGSGGSSRASWQMVGGNLGRPHLGVATTGLWPPHVSGFGFQTATTTTTTTSSGPSNATLATESSNYLQKIAFPGFDLPTSATNMGHMSFTSILGGAGSQQMPGLELGLSQDGHIGVLNPQALNQIYQQMNHQAQAGRVHQQHQHQQQQHQQTPAKDDSQGSGGQ* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0829 330 PANTHER TRANSCRIPTION FACTOR TCP20-LIKE 30 328 - -
Gso19g0829 330 MobiDBLite consensus disorder prediction 296 330 - -
Gso19g0829 330 MobiDBLite consensus disorder prediction 1 84 - -
Gso19g0829 330 MobiDBLite consensus disorder prediction 1 42 - -
Gso19g0829 330 ProSiteProfiles TCP domain profile. 72 126 IPR017887 -
Gso19g0829 330 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 30 328 IPR005333 GO:0003700
Gso19g0829 330 MobiDBLite consensus disorder prediction 50 84 - -
Gso19g0829 330 Pfam TCP family transcription factor 71 162 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0829 Gso-Chr19 33687974 33689809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0829 1 328 TCP Transcription Factor Family AT3G27010 52.464 9.05e-84 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gso19g0829 TCP 1.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0829 - - gmx:100800779 576.63