Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0815 ATGGAGAATTATTCCATGTTGTTCTCTGTTTCCAATTCCTCAAGCTACCCAATTGGAGTTGGAAGCTCTCAAATTGGTTATAGTGGTCAAAGCTCCAATGCGTTTCTTGGTCTAAGGCCTAGTAATGAATTAGCTAGTGATGATCATGAGAAGAGACAAGGTGGTGGTGATGGCAATATGTTAATGTCTCAGATCAGTGGTGGTAGCATTAATGTGAGTGATGAGTTAGGTGGTTCGGGAAATAGTAACAATAATAAAAAGAAAGGAGAGAAAAAGGTTAGAAAGCCTAGATATGCTTTTCAAACAAGGAGCCAGGTTGATATTCTTGATGATGGTTACCGATGGAGGAAGTATGGCCAAAAAGCTGTTAAAAACAACAAATTTCCAAGGAGCTACTACAGGTGCACGCATCAAGGGTGCAATGTGAAGAAGCAAGTGCAACGCTTAACCAAAGACGAAGGAGTAGTGGTAACCACTTATGAGGGAGTGCACACACACCCAATTGAGAAGACAACAGATAACTTTGAGCACATTTTGAGTCAGATGCAAATATACACTCCCTTCTGA 567 0.4074 MENYSMLFSVSNSSSYPIGVGSSQIGYSGQSSNAFLGLRPSNELASDDHEKRQGGGDGNMLMSQISGGSINVSDELGGSGNSNNNKKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMQIYTPF* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0815 188 MobiDBLite consensus disorder prediction 71 95 - -
Gso19g0815 188 Gene3D WRKY domain 94 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso19g0815 188 ProSiteProfiles WRKY domain profile. 104 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso19g0815 188 MobiDBLite consensus disorder prediction 45 64 - -
Gso19g0815 188 Pfam WRKY DNA -binding domain 110 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso19g0815 188 SUPERFAMILY WRKY DNA-binding domain 101 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso19g0815 188 SMART WRKY_cls 109 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso19g0815 188 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 73 184 - -
Gso19g0815 188 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 73 184 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0815 Gso-Chr19 33265190 33267643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0815 97 188 WRKY Transcription Factor Family AT5G13080 88.043 3.95e-59 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso19g0815 WRKY 1.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0815 - - gmx:732586 353.984