Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso19g0783 | ATGGGAGAGGATTCTGGGGAGTTTGGAGAAAGCACAAAAATCAATCACAAGATGGAAAATGTTGAAAGAGAAGAAGAAATAGACCCAGAAAGCAATCCACTGAATGAGCCACTGCTCAAGCGGAACCGGACACTGTCTTCCAACCCTCTTGCTCTGGTTGGAGAAAAAGTTTCCTACATAGAAAGCTTGGACTATGAGATAAATGAGAATGATCTATTCAAGCATGACTGGAGGAGCAGATCAAGAGTTCAAGTGTTGCAGTATATATTCTTGAAATGGTTACTAGCATTCCTTGTTGGACTTCTCACTGGTATTATAGCCACTCTCATCAATCTTGCAGTTGAGAATATTGCTGGGTATAAGCTTCTGGCTGTTCTTAAATACATCCACAAAGAAAGGTACTTGACGGGTTTCCTATATTTCACGGGCATTAATTTCGTTTTGACGTTTGTTGCTGCTATTCTCTGTGTGTGTTTTGCACCCACAGCAGCAGGACCTGGAATTCCTGAAATCAAAGCTTATCTTAATGGTGTTGATACTCCCAACATGTTTGGTGCTACAACATTGATTGTCAAGATAATTGGAAGCATTGGGGCTGTCTCTGCAGGCCTAGATTTGGGAAAAGAAGGACCGTTGGTGCATATAGGAAGCTGCATTGCTTCCTTACTAGGCCAGGGAGGCCCTGACAATTACAGGATCAAATGGCGCTGGCTTCGATATTTTAACAATGATCGTGACCGTCGGGATCTTATCACCTGTGGTTCATCTTCGGGAGTTTGTGCAGCTTTCCGGGCTCCAGTTGGTGGAGTTCTCTTTGCTCTTGAAGAGGTGGCAACCTGGTGGAGAAGTGCTCTCCTGTGGAGAACTTTTTTCAGCACAGCTGTGGTGGTGGTGGTGCTCAGGGCCTTCATTGAAATCTGTCATACTGGGAAATGCGGCCTTTTTGGTGAAGGAGGATTGATCATGTTTGACGTAAGCAATGTCACAGTGAGGTACCATGTTATGGATATTGTCCTTGTTGTAGTCATTGGAATCATTGGCGGGGTATTGGGAAGCCTTTACAATCATGTACTACACAAGGTCCTCAGACTCTACAATCTCATCAATCATCTTGCAGTTGCACTATTCACATCAATGTGCGAATATGGTCTCCCATTCTTAGCAAAATGCACCCCATGTGATCCATCACTTCCAGAGTCAACCTGCCCCACCAATGGACGGTCTGGGAATTTCAAACAATTTAACTGCCCACCTGGCTACTACAATGATCTTGCTACTCTGCTGCTTACCACTAATGATGATGCCGTTCGAAATATATTCTCAACTAACACCCCTCAAGAATATCAACCCTTGTCCCTCGTAATTTTCTTTGTACTCTATTGCATATTAGGACTAATCACTTTTGGAATTGCTGTGCCATCTGGGCTCTTCCTCCCAATCATTCTTATGGGCTCAGGTTATGGCCGCCTTCTCGGCATCTACATGGGACCTCATACAAACATTGACCAAGGGCTGTTTGCAGTACTAGGTGCAGCCTCCCTCATGGCTGGTTCCATGAGGATGACTGTATCCCTTTGTGTGATCTTCCTTGAACTCACCAACAATCTTCTCCTACTACCAATAACAATGATTGTCCTCCTAATAGCCAAAACTGTTGGAGACAGTTTCAACCCAAGCATCTATGAGATTATACTGCACTTGAAAGGCCTTCCTTTCATGGATGCAAATCCTGAGCCATGGATGAGAAATCTCACTGTGGGTGAGCTTGTTGATGTAAAGCCATCAGTGGTTACCCTCCATGGAGTAGAAAAGGTAGCCAAAATAGTAGATGTCTTGAAAAACACTACACATAATGCTTTCCCTGTTATGGACGATGGGGTAGTACCACCAGTAGTAGGACAGGCCAATGGGGGAACAGAACTGCATGGACTGATTCTAAGAGCACATCTCATCCAAGCACTAAAGAAGAAGTGGTTCCTTAAAGAAAGAAGGAGAACAGAGGAATGGGAAGTGAGAGAGAAATTTACCTGGGTAGAGCTGGCTGAGAGAGAAGGAAGTATTGAAGAGGTGGCTGTGACCAGTGAGGAAATGGAGATGTTTGTTGATCTACATCCTCTTACCAATACAACTCCCTTTACAGTGCTAGAGAGCATGTCAGTAGCAAAAGCAATGATCCTCTTCAGGCAAGTTGGACTTCGCCATCTGCTTGTAGTACCCAAGTATCAAGCATCTGGGGTATCCCCAGTAATTGGGATCTTGACCAGGCAAGATCTTCTTGCCCATAACATTCTGACAGTCTTTCCTCACCTGGCAATATCTAAGGGTAGAGAAAAGAGGAATTGA | 2343 | 0.4434 | MGEDSGEFGESTKINHKMENVEREEEIDPESNPLNEPLLKRNRTLSSNPLALVGEKVSYIESLDYEINENDLFKHDWRSRSRVQVLQYIFLKWLLAFLVGLLTGIIATLINLAVENIAGYKLLAVLKYIHKERYLTGFLYFTGINFVLTFVAAILCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLIVKIIGSIGAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDNYRIKWRWLRYFNNDRDRRDLITCGSSSGVCAAFRAPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFIEICHTGKCGLFGEGGLIMFDVSNVTVRYHVMDIVLVVVIGIIGGVLGSLYNHVLHKVLRLYNLINHLAVALFTSMCEYGLPFLAKCTPCDPSLPESTCPTNGRSGNFKQFNCPPGYYNDLATLLLTTNDDAVRNIFSTNTPQEYQPLSLVIFFVLYCILGLITFGIAVPSGLFLPIILMGSGYGRLLGIYMGPHTNIDQGLFAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSIYEIILHLKGLPFMDANPEPWMRNLTVGELVDVKPSVVTLHGVEKVAKIVDVLKNTTHNAFPVMDDGVVPPVVGQANGGTELHGLILRAHLIQALKKKWFLKERRRTEEWEVREKFTWVELAEREGSIEEVAVTSEEMEMFVDLHPLTNTTPFTVLESMSVAKAMILFRQVGLRHLLVVPKYQASGVSPVIGILTRQDLLAHNILTVFPHLAISKGREKRN* | 781 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso19g0783 | 780 | CDD | ClC_6_like | 61 | 573 | - | - | |
Gso19g0783 | 780 | Pfam | Voltage gated chloride channel | 149 | 553 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Gso19g0783 | 780 | Pfam | CBS domain | 709 | 759 | IPR000644 | - | |
Gso19g0783 | 780 | PANTHER | CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER | 8 | 775 | - | - | |
Gso19g0783 | 780 | SUPERFAMILY | CBS-domain pair | 577 | 760 | IPR046342 | - | |
Gso19g0783 | 780 | ProSiteProfiles | CBS domain profile. | 707 | 772 | IPR000644 | - | |
Gso19g0783 | 780 | PANTHER | CHLORIDE CHANNEL PROTEIN | 8 | 775 | - | - | |
Gso19g0783 | 780 | SMART | cbs_1 | 710 | 763 | IPR000644 | - | |
Gso19g0783 | 780 | SMART | cbs_1 | 595 | 655 | IPR000644 | - | |
Gso19g0783 | 780 | Gene3D | - | 581 | 762 | IPR046342 | - | |
Gso19g0783 | 780 | PRINTS | Plant CLC chloride channel signature | 66 | 74 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Gso19g0783 | 780 | PRINTS | Plant CLC chloride channel signature | 277 | 285 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Gso19g0783 | 780 | PRINTS | Plant CLC chloride channel signature | 291 | 301 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Gso19g0783 | 780 | PRINTS | Plant CLC chloride channel signature | 309 | 316 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Gso19g0783 | 780 | PRINTS | Plant CLC chloride channel signature | 424 | 440 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Gso19g0783 | 780 | SUPERFAMILY | Clc chloride channel | 70 | 575 | IPR014743 | - | |
Gso19g0783 | 780 | MobiDBLite | consensus disorder prediction | 9 | 30 | - | - | |
Gso19g0783 | 780 | CDD | CBS_pair_voltage-gated_CLC_euk_bac | 593 | 761 | - | - | |
Gso19g0783 | 780 | Gene3D | Clc chloride channel | 83 | 575 | - | - | |
Gso19g0783 | 780 | PRINTS | Chloride channel signature | 161 | 178 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Gso19g0783 | 780 | PRINTS | Chloride channel signature | 192 | 211 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Gso19g0783 | 780 | PRINTS | Chloride channel signature | 256 | 275 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Gso19g0783 | 780 | PRINTS | Chloride channel signature | 472 | 492 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Gso19g0783 | 780 | PRINTS | Chloride channel signature | 504 | 520 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Gso19g0783 | 780 | PRINTS | Chloride channel signature | 522 | 541 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Gso19g0783 | 780 | PRINTS | Chloride channel signature | 560 | 574 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Gso19g0783 | 780 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso19g0783 | Gso-Chr19 | 31906644 | 31911602 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso19g0783 | 3 | 775 | Ion Channels | AT3G27170 | 78.416 | 0.0 | 1231 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso19g0783 | K05016 | - | gmx:100788620 | 1487.63 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso19g0783 | 19 | 31906644 | 31911602 | Gso16g0475 | 16 | 5606464 | 5612042 | GST | |
Gso19g0783 | 19 | 31906644 | 31911602 | Gso5g0669 | 5 | 10002421 | 10007490 | PCT | |
Gso5g0669 | 5 | 10002421 | 10007490 | Gso19g0783 | 19 | 31906644 | 31911602 | PCT |