Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0762 ATGCCCCTCCTTATTATTTTTTCACTTCCCAAAGTGTTGTCCCTCACTCTATCTTATGCTACTGCTTCTCATCTTTGCCTCCTAGTGGTGCCCTTTCTCCCTTTGAAATTGGTAGCTAAGTTTGATGTTCACATTCAAAAAGTTTGGTGCCTAATGCTCAGAGTTGGTTCAATGAGATATTTTTACCTCTATCTTGTGGTTCTTACTTGGTTTTTGTCCATCCCTTGTACCCACGAACTACAACTTGCTCAGACCCAAGTTCTGTTACAGTTAAGAAAGTATCTGGAGTACCCTACCTCTCTGCAAATGTGGGAAAATTACAATGTAGACCTTTGTAGCCTTCCTCCATCTGCACATGTGAGCCTTAAGTGTGAGGGTAATTCAGTAACTGAGCTTAAAATTATAGGAGATAGAGCTGTGAAGGTTGACAAGTTCAATGGACCTGCAGTTCCCAATCATACACTGTCACTGAGCTTCTCCATTGATTCTTTTGTCACCACATTGACGAGGTTAACCAACTTAAGGGTCCTTAGATTGGTGTCCTTGGGGATTTGGGGGCCACTTCCTGATAAAATTCATAGGCTGTCTTTGCTTGAAGTTTTGGATATGAGTTTAAATTTCTTATATGGTTCAGTGCCACCAAGAATGTCTACAATGGTCAAGCTTCATACACTGACACTAGATGGCAATGGTTTGAACAGCACAATGCCTGATTGGTTTGATTCTTTAACTAATCTAAGTGTATTGAGTTTGAAGAGTAACCACTTAAAGGGTTCATTCCCTTCTTCACTATGCAAAATTAGGAGTCTTGTTGATATTTCCTTGTCCCACAATGAGTTGTCTGGTGGATTGCCTGATCTCATTGCTCTCTCTGGTCTACATGTACTTGATTTAAGAGAAAATCATTTAGATTCTGAACTGCCACTGATGCCTAAAGCAGTGGTCACAATTTTGCTTAGCAAAAATTCTTTTTCAGGTGAGATACCAAATCAGTTTAGTGAATTGGGCCATCTTCAGCATCTAGATCTTTCATCAAATCATCTCAGTAAGATGCCCCCATCTTCCTTGTTCTCTTTGCCAAACATTAGCTATTTGAATTTAGCCAGCAATGAGCTAAGTGGATCCCTTCCACAGAAACTAAACTGTGGCAGCAAACTTGGGTTTGTGGATATCTCTAGTAACAAGTTAAATGCTGGACTTCCTTCTTGCTTGGCCAATACATCGGGTAAAAGAGTTATTAAATATGGTGGAAACTGTTTATCTATTGATTCTCAACCTCAGCGGCAAGGGACTTATTGTAAAGAATCCAGTTTGGGAAAGAAGAACTTCTGGAAATGGAAAATAGCTGCAGCAGTTGCCATGATTATTGTAATTGTTCTTGTACTTTCTGCTTTTGGAGTTTTTTTTTATAGAAAATATCATTCAAGGGAGATGTATAGGCATCAGATGTTGCCTAAGGCTGTTCAAGATAACTCAATAACAGGAGTTTCATCTGAAGTCCTTGCCAGTGCTAGATTCGTTTCTCAAGTAGTGAAGCTAGGGACACAAGCTACTCCTACATGTAGACAATTTTCAATTGAAGAGTTGAAGGAAGTCACAAGAAACTTTGATTTGTCAACTTATATTGGCGAAGGCTCCTTAGGAAAGCTGTACAAAGGTAAACTAGAGAATGGAACCTATGTGGTGATAAGATGTGTGGCTCTGTCAAAGAAATGCTCAATACAAAATCTTAAAGCTCGGTTGGATTTACTCTCAAAGCTGAACCATCCAAATTTGGTTAGCCTTTTGGGTCATTGTGTTGATGGTGATGGACAAGATGATTCTAGTGGCCTCAAACTTCATCTTGTTTATGAGTATGTGCTGAATGGGAGCTATCGTACCCATCTGTCAGAATTTTCATCAGACAAGGGACTGAAGTGGTCTGATAGATTATCAATTTTAATTGGAGTTGCCAAAGCTGTGCACTTTTTACATACTGGAGTTATACCGGGTTGTTTTAGAAACCAGTTAAAGACAAACAATATTTTACTTGATGAGCATCACATTCCCAAACTAAGTGACTATGGTATGTCCATGATTGCTGAGGAGATCGAATACCTTGAGGCAAAGGGAGAGTATCCAAAATCATGCCAAAGAGAAAAATTAGAAGATGATGTCTACAATTTCGGGTTGATACTGTTTGAGTCTCTTGTTGGACCCATAGCAAGCAAGAAAGGAGAGAAATATTTTCTTGATGAAAAGACATCCTTTGACAGTCAAGATGGCAGAATTAAAATAGTGGATCCAGTAGTGTTAACCACTTGCTGTCCAGAGTCATTATCAATTGCAATATCTATCACAACCAAATGCATATCCCCAGAATCCTCAGCTCCTCCTTCTTTTGAGGATGTCTTATGGAACTTACAGTATGCAGCTCAAGTCCAAGCCACAGCAGATGCAGAACAAAAATCAGATTCTACATCCTAA 2466 0.3929 MPLLIIFSLPKVLSLTLSYATASHLCLLVVPFLPLKLVAKFDVHIQKVWCLMLRVGSMRYFYLYLVVLTWFLSIPCTHELQLAQTQVLLQLRKYLEYPTSLQMWENYNVDLCSLPPSAHVSLKCEGNSVTELKIIGDRAVKVDKFNGPAVPNHTLSLSFSIDSFVTTLTRLTNLRVLRLVSLGIWGPLPDKIHRLSLLEVLDMSLNFLYGSVPPRMSTMVKLHTLTLDGNGLNSTMPDWFDSLTNLSVLSLKSNHLKGSFPSSLCKIRSLVDISLSHNELSGGLPDLIALSGLHVLDLRENHLDSELPLMPKAVVTILLSKNSFSGEIPNQFSELGHLQHLDLSSNHLSKMPPSSLFSLPNISYLNLASNELSGSLPQKLNCGSKLGFVDISSNKLNAGLPSCLANTSGKRVIKYGGNCLSIDSQPQRQGTYCKESSLGKKNFWKWKIAAAVAMIIVIVLVLSAFGVFFYRKYHSREMYRHQMLPKAVQDNSITGVSSEVLASARFVSQVVKLGTQATPTCRQFSIEELKEVTRNFDLSTYIGEGSLGKLYKGKLENGTYVVIRCVALSKKCSIQNLKARLDLLSKLNHPNLVSLLGHCVDGDGQDDSSGLKLHLVYEYVLNGSYRTHLSEFSSDKGLKWSDRLSILIGVAKAVHFLHTGVIPGCFRNQLKTNNILLDEHHIPKLSDYGMSMIAEEIEYLEAKGEYPKSCQREKLEDDVYNFGLILFESLVGPIASKKGEKYFLDEKTSFDSQDGRIKIVDPVVLTTCCPESLSIAISITTKCISPESSAPPSFEDVLWNLQYAAQVQATADAEQKSDSTS* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0762 821 SUPERFAMILY Protein kinase-like (PK-like) 518 801 IPR011009 -
Gso19g0762 821 Gene3D Transferase(Phosphotransferase) domain 1 621 820 - -
Gso19g0762 821 PANTHER OS07G0166700 PROTEIN 61 820 IPR045272 GO:0004714|GO:0006468
Gso19g0762 821 ProSiteProfiles Protein kinase domain profile. 536 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0762 821 SUPERFAMILY L domain-like 168 421 - -
Gso19g0762 821 Pfam Protein tyrosine and serine/threonine kinase 538 728 IPR001245 GO:0004672|GO:0006468
Gso19g0762 821 Gene3D Ribonuclease Inhibitor 313 442 IPR032675 -
Gso19g0762 821 Gene3D Phosphorylase Kinase; domain 1 508 619 - -
Gso19g0762 821 Pfam Leucine rich repeat 316 372 IPR001611 GO:0005515
Gso19g0762 821 Pfam Leucine rich repeat 221 280 IPR001611 GO:0005515
Gso19g0762 821 ProSiteProfiles Leucine-rich repeat profile. 337 358 IPR001611 GO:0005515
Gso19g0762 821 SMART LRR_typ_2 219 242 IPR003591 -
Gso19g0762 821 SMART LRR_typ_2 243 267 IPR003591 -
Gso19g0762 821 SMART LRR_typ_2 335 358 IPR003591 -
Gso19g0762 821 SMART LRR_typ_2 359 383 IPR003591 -
Gso19g0762 821 SMART LRR_typ_2 290 313 IPR003591 -
Gso19g0762 821 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 61 820 - -
Gso19g0762 821 Gene3D Ribonuclease Inhibitor 82 312 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0762 Gso-Chr19 31220450 31225827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0762 63 746 Miscellaneous Gene Families AT5G14210 58.934 0.0 784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Gso19g0762 PK_Tyr_Ser-Thr 9.9e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0762 - - gmx:100813412 1596.25