Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0733 ATGGTAAGGGCTCGTTGTTGTGAGAAAGTGGGATTGAAAAAGGGAAGGTGGACAACGGAGGAGGACATCATATTGGTGTCTTATATTCAGGAACATGGTCCTGGAAATTGGAGGGCAGTTCTTGCCAAAACAGGGTTTTCAAGATGCAGCAAGAGTTGCAGACTTAGATCAACTAATTACCTGAGGCCAGGAATCAAACAAGGCAACTTCTCAGAACAAGAGGAGAAGATGATAATCCATCTTCAAGATCTTTTAGGAAACAGGTACAAATCAATCTTCCAAGCACCTACTTAG 294 0.4252 MVRARCCEKVGLKKGRWTTEEDIILVSYIQEHGPGNWRAVLAKTGFSRCSKSCRLRSTNYLRPGIKQGNFSEQEEKMIIHLQDLLGNRYKSIFQAPT* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0733 97 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Gso19g0733 97 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 92 - -
Gso19g0733 97 CDD SANT 16 61 IPR001005 -
Gso19g0733 97 PANTHER TRANSCRIPTION FACTOR MYB94-RELATED 1 92 - -
Gso19g0733 97 SUPERFAMILY Homeodomain-like 15 92 IPR009057 -
Gso19g0733 97 Gene3D - 13 66 - -
Gso19g0733 97 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Gso19g0733 97 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Gso19g0733 97 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0733 Gso-Chr19 30153677 30233453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0733 1 92 MYB Transcription Factor Family AT5G62470 75.000 1.99e-47 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso19g0733 Myb_DNA-binding 7.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0733 K09422 - gmx:780543 160.999